多态现象,单链构象

多态现象,单链构象的相关文献在1998年到2013年内共计66篇,主要集中在肿瘤学、内科学、基础医学 等领域,其中期刊论文66篇、专利文献226458篇;相关期刊36种,包括中国防痨杂志、国际检验医学杂志、中华检验医学杂志等; 多态现象,单链构象的相关文献由310位作者贡献,包括李洪敏、吴雪琼、解用虹等。

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多态现象,单链构象—发文趋势图

多态现象,单链构象

-研究学者

  • 李洪敏
  • 吴雪琼
  • 解用虹
  • 刘新宇
  • 李明
  • 梁建琴
  • 穆云翔
  • 赵郁
  • 于文彬
  • 张俊仙
  • 期刊论文
  • 专利文献

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    • 付伟伟; 纪祥瑞; 王宁; 孙玲玲; 李宏
    • 摘要: 目的了解β-连环蛋白(β-catenin)基因在胃癌组织中的突变情况及其作用。方法以35例新鲜胃癌标本和10例癌旁组织中提取的DNA为模板,采用聚合酶链反应(PCR)-单链构象多态性(SSCP)法对β-catenin的exon3基因突变进行筛选,对筛选阳性标本进行DNA序列测定。采用PV-9000免疫组化两步法检测β-catenin蛋白表达。结果 1例分化不良型胃癌组织中检测到β-catenin exon3基因突变,表现为编码C处单碱基插入突变。癌旁组织β-catenin蛋白连续性表达于细胞膜上;胃癌组织中β-catenin蛋白在细胞膜表达明显减弱甚至消失,7例(20%)在胞浆、胞核内异常蓄积。结论β-catenin基因突变可能不是胃癌肿瘤演进过程中主要的事件。
    • 张凝宇; 楼瑾; 李明; 陶小梅; 张琼丽; 蔡云; 卓家才; 杜新
    • 摘要: 目的 了解多发性骨髓瘤(MM)患者微小RNA(miRNA)基因突变率及其临床意义.方法 采用聚介酶链反应单链构象多态性(PCR-SSCP)银染法检测4种人类MM细胞系(KM-3、ARH-77、U266、RPMI8226)、20例MM患者及20例血液学正常者12种miRNA基因突变,实验结果结合临床分析.结果 细胞系KM-3、RPMI8226检测出miRNA-335基因突变;MM患者中检出miR-19a、miR-19b和miRNA-335基因突变各1例,总突变率为15.00%(3/20);正常对照组未检出突变.病例组突变者中1例确诊4个月左右死亡,2例取材时已处于疾病终末期.结论 miRNA基因在MM中存在较高的突变率,miR-19a、miR-19b和miRNA-335基因突变可能与MM发病机制有关;发生突变的患者(表现)临床预后差,对miR-19a、miR-19b和miRNA-335基因突变的检测可能有助于对MM病程进展和预后的分析.%Objective To investigate sequence variations of 12 miRNA genes in multiple myeloma(MM) in order to find whether sequence variations in miRNA genes are associated with tumorigenesis and discuss the clinical significance of MM associated with miRNA genes mutations. Methods The miRNA gene mutations in 20 cases of MM, 4 MM-derived cell lines and 20 controls were detected by the methods of polymerase chain reaction single stranded conformation polymorphism (PCR-SSCP) and silver staining technique. Both clinical features and laboratory results were analyzed simultaneously. Results The electrophoretic patterns showed a total of three variations in miR-19a, miR-19b and miRNA-335,which were observed in 3 MM cells (15 %, 3/20). We also found variations of miRNA-335 in MM-derived cell lines KM-3and RPMI8226. However, no sequence alteration in the miRNA genes was observed in our set of controls. One of the three MM patients died, and two of them were detected mutations at the terminal stage of the disease.Conclusion A relative high frequency of miRNA gene mutation was found in MM and MM derived cell lines, which suggests possibility of a main mechanism underlying tumorigenesis. And, detecting miRNA gene mutations in MM might be benefit to evaluate the progression and prognosis of disease.
    • 黄阿莉; 李卉
    • 摘要: 目的 建立快速检测结核分支杆菌耐药基因的分子药敏方法.方法 要聚合酶链反应--单链构象多态性(PCR-SSCP)分析40株结核分支杆菌KatG基因突变.其中20株为异烟肼(INH)敏感株,20株为INH耐药株,用PCR-SSCP图谱鉴定扩增产物有无突变,H37RV标准株作对照.结果 所有INH敏感株SSCP带普与对照相同;19株INH耐药株中8株与对照相同,11株有不同程度的差异,INH耐存KatG基因突变或缺失的阴性率为60%.结论 多数结核分支杆菌INH是由于其KatGj基因突变所致,用PCR-SSCP筛选突变株可达到快速检测结核分支杆菌INH耐药的目的.
    • 梁建琴; 吴雪琼; 张西峰; 王金河; 陈志; 冯士生
    • 摘要: 目的 探讨反向斑点杂交技术在脊柱结核分枝杆菌菌种鉴定中的应用价值.方法 通过16S rDNA聚合酶链反应-单链构象多态性(polymerase chain reaction -single strand conformation polymorphism,PCR-SSCP)分析鉴定37例脊柱结核术后患者病理组织或脓液抗酸染色阳性标本的分枝杆菌菌种;设计与合成用于鉴定分枝杆菌菌种的16S rDNA寡核苷酸探针,制作硝酸纤维膜微阵列,与待鉴定菌株生物索标记的16S rDNA基因PCR产物进行反向斑点杂交.结果 37例脊柱结核标本中.经16S rDNA PCR-SSCP初步鉴定,36株为结核分枝杆菌复合群,1株为非结核分枝杆菌;经杂交分析,34株结核分枝杆菌分离株鉴定为结核分枝杆菌复合群,1株鉴定为偶发分枝杆菌,分别与相应的特异探针杂交,2株与分析探针杂交阴性.结论 16SrDNA PCR-反向斑点杂交技术可用于快速鉴定脊柱结核分枝杆菌菌种.
    • 李洪敏; 张广宇; 杨楠; 张霞; 刘银萍; 杨栗坤; 孔祥瑞
    • 摘要: 目的 通过诱导试验观察结核菌产生耐利福平药物的全过程,初步分析结核菌耐该药的机理.方法 采用诱导试验、聚合酶链反应-单链构象多态性(PCR-SSCP)和序列分析,对经不同药物浓度传代培养后的结核菌强毒株(H37Rv)和36株临床耐药分离株进行分析.结果 在诱导到第7代时,H37Rv的PCR-SSCP电泳出现异常,经测序证实在513位点发生基因突变.36株临床耐药分离株中有23株发生突变,为63.9%(23/36);其中有5株与诱导株基因突变位点相同.结论 用药物不间断的刺激结核菌,是产生结核菌耐利福平药物的重要原因.
    • 吴吉芹; 朱利平; 关明; 张心菊; 徐斌; 区雪婷; 章强强; 翁心华
    • 摘要: Objective To develop an assay based on high resolution melting (HRM) technique for detecting two major CYP2C19 alleles, CYP2CI9 * 2 and CYP2C19 * 3. Methods HRM curves were analyzed and genotypes of CYP2C19 * 2 and CYP2C19 * 3 were determined. The HRM results were compared with those obtained from PCR-restriction fragment length polymorphism (RFLP) assay or sequencing. HRM was further used in the genotyping in 47 patients with invasive fungal infections. Results There was excellent consistency in results obtained by HRM and PCR-RFLP. Genotypes were confirmed by DNA sequencing. CYP2C19 genotypes can be readily and rapidly detected with HRM assay. Various genotypes were detected in 47 clinical samples, 48.9% ( 23/47 ) were CYP2C19 * 1/* 1, 25.5% ( 12/47 ) were CYP2CI9 * 1/* 2, 6. 4% (3/47) were CYP2C19 * 1/* 3, 12. 8% (6/47) were C~P2C19 * 2/* 2, and 6. 4% (3/47) were CYP2C19 * 2/* 3. Conclusions HRM is a more rapid and sensitive method for detection of CYP2C19 genotypes compared with RFLP assay. CYP2C19 exhibits significant genetic polymorphism in patients with invasive fungal infection.%目的 探讨高分辨熔解方法 (high resolution melting,HRM)检测真菌感染患者CYP2C19遗传多态性的可行性.方法 建立HRM方法 检测CYP2C19 * 2和CYP2C19 * 3两个多态性位点的基因型,并与传统方法 PCR-限制性片段长度多态性(PCR-RFLP)及序列分析结果 相比较,进一步应用于47例真菌感染患者基因型的检测与分析.结果 2种方法 检测CYP2C19 * 2和CYP2C19* 3基因型结果 完全一致,与DNA序列分析结果 也相吻合,而HRM方法 操作更为简便,耗时更短.47份临床标本检测结果 显示,CYP2C19的2个多态性位点存在不同基因型,CYP2C19 * 1/ * 1所占比例为48.9%(23/47),CYP2C19 * 1/ * 2为25.5%(12/47),CYP2C19 * 1/ * 3为6.4%(3/47),CYP2C19 * 2/ * 2为12.8%(6/47),CYP2C19 * 2/ * 3为6.4%(3/47).结论 HRM方法 能有效检测CYP2C19基因多态性,且较PCR-RFLP方法 更为简便、快速.此外,CYP2C19基因在真菌感染患者中存在明显的遗传多态性.
    • 程晓东; 郝晓柯; 杨柳; 刘家云; 岳乔红; 徐修礼; 马越云; 彭道荣; 于文彬; 苏明权
    • 摘要: 目的 探讨应用多重PCR-单链构象多态性分析(multiplexpulymerase chain reaction-single strand conformation polymorphism,multi-PCR-SSCP)方法快速、特异地同时快速检测结核分枝杆菌对异烟肼和利福平耐药性的效能.方法 根据结核分枝杆菌的inhA序列、katG序列、rpoB序列,分别设计出3对特异性寡聚核苷酸引物.采用multi-PCR-SSCP技术,一次性检出耐异烟肼和利福平的结核分枝杆菌.新方法的有效性通过116株临床分离株(70株耐异烟肼,66株耐利福平)的验证.结果 名 Multi-PCR-SSCP方法检测临床分离株基因突变的有效性,以细菌培养和药敏试验结果为金标准.116株临床分离株和H37Rv标准株中除了4株katG缺失突变,其余菌株3个基因katG、inhA和rpoB在单基因PCR中都扩增成功.与H37Rv标准株相比,46株katG基因突变,14株inhA基因突变,58株rpoB基因突变.38株katG和rpoB,4株inhA和rpoB,4株inhA和katG同时突变,还有2株3个基因都有突变.multi-PCR-SSCP对于耐异烟肼和利福平的结核分枝杆菌检出的敏感度分别为80%、82%,特异度分别为100%和92%.结论 multi-PCR-SSCP方法敏感、特异,能同时快速有效地检测耐多药结核分枝杆菌,有望成为临床指导用药的好方法,为深入研究耐药基凶检测奠定了良好的基础.%Objective To detect the isoniazid (INH) and rifampin (RIF) resistance of Mycohaeterium tuberculosis isolates in the single tube with multiplex-polymerase chain reaction-single strand conformation polymorphism(muhi-PCR-SSCP) system. Methods According to the sequences of inhA, katG and rpoB genes of the Mycohacterium tuberculosis, three pairs of oligonucleotide primes were designed to examine the INH and RIF resistance with the multi-PCR-SSCP. The validity of the newly developed method was evaluated with 116 clinical isolates of Mycohacterium tuberculosis( 70 isolates that were INH-resistant and 66 isolates that were RIF-resistant). Results The validity of the method was assessed with multiplex PCR-SSCP with the bacteria culture with susceptibility test as golden standard. The three genes, katG, inhA and rpoB, in the 116 clinical isolates and H37Rv strain were amplified successfully in single PCR reactions,except 4 isolates with katG deletion mutants. Compared with strain H37Rv, forty-six isolates had katG gene mutations, thirteen had inhA mutations and fifty-eight had rpoB mutations. Thirty-eight isolates had simultaneous katG and rpoB mutations and 4 isolates had both inhA and rpoB mutations. Four isolates had inhA and katG mutations and 2 isolates had mutations in all three genes simultaneously. The sensitivity of the newly developed multiplex-PCR-SSCP assay was 80% and 82% for INH and RIF, respectively. The specificity of the assay was 100% and 92% for INH and RIF, respectively. Conclusion Muhiplex-PCRSSCP provides a rapid, specific and cost-effective method of detecting multidrug-resistant TB. It laid a solid foundation for the further study of drug resistant gene.
    • 潘晓冬; 王绿娅; 吴成爱; 蔺洁; 刘舒; 杜兰萍
    • 摘要: Objective To investigate the application of polymerase chain reaction and single strand conformation polymorphism analysis(PCR-SSCP)to the screening of gene mutation of exon 13 of the LDLR gene in familial hypercholesterolemia(FH).Methods Peripheral blood DNA of 16 clinically diagnosed FH patients was extracted and the exon 13 coding region of the LDLR gene was amplified by PCR.PCR products were separated by optimized SSCP electrophoresis and visualized by silver staining.DNA fragments with abnormal mobility were sequenced to determine the nature and position of mutations.Results The SSCP electrophoresis conditions were optimized as 8%polyaerylamide(degree of cross linking 49:1)gel without glycerin at a electrophoresis temperature of 10°C or 8%polyacrylamide gel with 5%glycerin at room temperature,gel thickness of<0.4 mm,and a voltage of 5 V/cm.DNA fragments were well resolved with the conditions and sequencing of the abnormal bands resuhed in detections of missense mutations of A606T,D601N,Y601D and G636V together with a synonymous mutation of 1959C→T in 4 patients and a sole synonymous mutation of 1959C→T in other 4 patients.Conclusion PCR-SSCP is an effective method for the screening of exon13 mutations of LDLR gene in FH patients.%目的 探讨单链构象多态性(SSCP)技术在家族性高胆固醇血症患者低密度脂蛋白受体(LDLR)基因13外显子点突变筛查上的应用价值.方法 以16例临床诊断为家族性高胆固醇血症(FH)患者为研究对象,提取外周血DNA,扩增LDLR基因第13号外显子片段,组合最优条件进行SSCP电泳并银染.对异常条带进行DNA序列测定确定其突变性质和位置.结果 优化SSCP电泳条件为:不含甘油8%凝胶,在10°C条件下电泳;含5%甘油的8%凝胶,在常温条件下电泳(交联度均为49:1).凝胶厚度均不超过0.4 mm,电泳电压为5 V/cm,在此条件下进行SSCP电泳均可以得到满意电泳图谱.对发现的异常条带,结合DNA测序证实有4例患者LDLR基因第13外显子分别发生A606T,D601N,Y601D,或G636V错义突变,同时均存在1959碱基C→T同义突变.另外4例患者13外显子仅存在1959碱基C→T同义突变.结论 通过优化各种条件进行的PCR-SSCP银染方法,是高胆固醇血症病LDLR基因13外显子点突变初步筛查的有效手段.
    • 魏广辉; 赵博; 王振军
    • 摘要: 目的 比较单链构象多态性分析(SSCP)和变性高效液相色谱分析技术(DHPLC)应用于遗传性非息肉病性结直肠癌(HNPCC)分子遗传学诊断的灵敏性和特异性.方法 应用PCR-SSCP和DHPLC方法分析经测序验证有序列变异的7个家系的所有成员的相应PCR扩增产物.分别计算SSCP和DHPLC的灵敏度和特异度.结果 应用SSCP对hMLH1和hMSH2进行基因突变筛查的敏感性和特异性分别为51.6%和66.6%:而应用DHPLC进行基因突变筛查的敏感性和特异性则分别为100%和93.3%:两种方法进行基因突变筛查的结果差异有统计学意义(P<0.05).结论 DHPLC进行基因突变筛查的敏感性和特异性均高于SSCP,是理想的分子遗传学检测方法.%Objective To compare the sensibility and specificity between single-stranded conformation polymorphism (SSCP) and denaturing high-performance liquid chromatography (DHPLC) in screening bMSH2 and hMLH1 gene mutations for the diagnosis of hereditary non-polyposis colorectal cancer (HNPCC). Methods Seven Chinese HNPCC kindreds were collected. PCR-SSCP and DHPLC were used to screen the coding regions of hMSH2 and hMLH1 genes and the abnormal profiles were sequenced by a 377 DNA sequencer. Results Seven gene sequence variations of hMSH2 or hMLH1 were found.Among them,4 variations were not found by SSCP,but by DHPLC.The sensibility of SSCP and DHPLC were 51.6% and 100% respectively, and the specificity were 66.6% and 93.3% respectively. Conclusion DHPLC has better sensibility and specificity in screening hMSH2 and hMLH1 gene mutation as compared to SSCP.DHPLC is an ideal method in the diagnosis of HNPCC.
    • 王文敬; 李明; 芮勇宇
    • 摘要: 目的 分析布鲁杆菌毒力相关基因OMP25(编码外膜蛋白OMP25)在中国布鲁杆菌中的多态性分布,为研究致病机制,预防和控制大规模暴发布鲁菌病的流行病学研究提供理论基础.方法 利用聚合酶链反应单链构象多态(single-strand conformation polymorphism,PCR-SSCP)方法检测116株布鲁杆菌(18株标准菌株和中国98株野生菌株)OMP25基因,取不同带型菌株的OMP25基因进行测序.结果 116株布鲁杆菌呈现8种不同图谱(1~8型),其中2型和7型是个别中国野生株所特有.8种带型仅有10个不同碱基在对应类型中发生变异,对编码蛋白氨基酸的改变不多.中国98株布鲁杆菌的OMP25基因高度保守,具有比较稳定的抗原特征.结论 高度保守性有助于布鲁杆菌的流行病学检测,为研制更安全有效的疫苗提供了理论依据.
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