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Pattern formation and nuclear divisions are uncoupled in Drosophila segmentation: comparison of spatially discrete and continuous models

机译:模式形成和核分裂在果蝇分割中是不耦合的:空间离散模型和连续模型的比较

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We study the relationship between pattern formation in Drosophila segment determination and nuclear structure by replacing the nuclei by a homogeneous continuum. Because this replacement cannot be performed experimentally, mathematical simulation is applied by transforming a previously published model of the segmentation system formulated in terms of explicit nuclear structure into partial differential equations. This transformation has changed the mathematical type of model equations and is therefore interpreted as a structural perturbation of the model. Parameter values are found for three continuum models by means of a new optimal steepest descent algorithm. Each of these models contains a different mathematical representation of nuclear divisions (mitoses). We obtained correct pattern dynamics from all of them, as well as from the model with explicit nuclear structure. This leads us to conclude that nuclear divisions are not coupled to pattern formation and serve only to populate the blastoderm with nuclei. We also investigate whether the calculated patterns in the developmental period modelled resemble their attractors, and find that they fail to do so. The implications of our results for models of biological pattern formation based on partial differential equations are discussed. (C) 2004 Elsevier B.V. All rights reserved.
机译:我们研究果蝇节确定中的模式形成与核结构之间的关系,方法是用同质连续体代替核。由于无法通过实验进行这种替换,因此通过将先前发布的根据明确核结构公式化的分割系统模型转换为偏微分方程,可以应用数学模拟。这种转换改变了模型方程的数学类型,因此被解释为模型的结构扰动。通过新的最佳最速下降算法找到三个连续模型的参数值。每个模型都包含核分裂(有丝分裂)的不同数学表示形式。我们从所有模型以及具有明确核结构的模型中获得了正确的模式动力学。这使我们得出结论,核分裂不与模式形成相关,而仅用于使胚盘充满核。我们还研究了在建模的发展时期中计算出的模式是否类似于其吸引子,并发现它们没有这样做。讨论了我们的结果对基于偏微分方程的生物模式形成模型的影响。 (C)2004 Elsevier B.V.保留所有权利。

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