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Assimilation of remotely sensed soil moisture and vegetation with a crop simulation model for maize yield prediction

机译:作物模拟模型对遥感土壤水分和植被的吸收

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摘要

To improve the prediction of crop yields at an aggregate scale, we developed a data assimilation-crop modeling framework that incorporates remotely sensed soil moisture and leaf area index (LAI) into a crop model using sequential data assimilation. The core of the framework is an Ensemble Kalman Filter (EnKF) used to control crop model runs, assimilate remote sensing (RS) data and update model state variables. We modified the Decision Support System for Agro-technology Transfer - Cropping System Model (DSSAT-CSM)-Maize model (Jones et al., 2003) to be able to stop and start simulations at any given time in the growing season, such that the EnKF can update model state variables as RS data become available. The data assimilation-crop modeling framework was evaluated against 2003-2009 maize yields in Story County, Iowa, USA, assimilating AMSR-E soil moisture and MODIS-LAI data independently and simultaneously. Assimilating LAI or soil moisture independently slightly improved the correlation of observed and simulated yields (R=0.51 and 0.50) compared to no data assimilation (open-loop; R=0.47) but prediction errors improved with reductions in MBE and RMSE by 0.5 and 0.5Mgha~(-1) respectively for LAI assimilation while these were reduced by 1.8 and 1.1Mgha~(-1) for soil moisture assimilation. Yield correlation improved more when both soil moisture and LAI were assimilated (R=0.65) suggesting a cause-effect interaction between soil moisture and LAI, prediction errors (MBE and RMSE) were also reduced by 1.7 and 1.8Mgha-1 with respect to open-loop simulations. Results suggest that assimilation of LAI independently might be preferable when conditions are extremely wet while assimilation of soil moisture+LAI might be more suitable when conditions are more nominal. AMSR-E soil moisture tends to be more biased under the presence of high vegetation (i.e., when crops are fully developed) and that updating rootzone soil moisture by near-surface soil moisture assimilation under very wet conditions could increase the modeled percolation causing excessive nitrogen (N) leaching hence reducing crop yields even with water stress reduced at a minimum due to soil moisture assimilation. However, applying the data assimilation-crop modeling framework strategically by considering a-priori information on climate condition expected during the growing season may improve yield prediction performance substantially, in our case with higher correlation (R=0.80) and more reductions in MBE and RMSE (2.5 and 3.3Mgha~(-1)) compared to when there is no data assimilation. Scaling AMSR-E soil moisture to the climatology of the model did not improve our data assimilation results because the model is also biased. Better soil moisture products e.g., from Soil Moisture Active Passive (SMAP) mission, may solve the soil moisture data issue in the near future.
机译:为了提高总体水平上对农作物产量的预测,我们开发了一个数据同化作物模型框架,该模型使用顺序数据同化将遥感土壤水分和叶面积指数(LAI)纳入作物模型。该框架的核心是一个集成卡尔曼滤波器(EnKF),用于控制农作物模型运行,吸收遥感(RS)数据并更新模型状态变量。我们修改了农业技术转让决策支持系统-种植系统模型(DSSAT-CSM)-玉米模型(Jones等人,2003年),以便能够在生长季节的任何给定时间停止和启动模拟,从而当RS数据可用时,EnKF可以更新模型状态变量。利用美国爱荷华州斯托里县的2003-2009年玉米单产对数据同化作物模型框架进行了评估,分别并同时吸收了AMSR-E的土壤水分和MODIS-LAI数据。与没有数据同化(开环; R = 0.47)相比,单独吸收LAI或土壤水分会稍微改善观测和模拟产量的相关性(R = 0.51和0.50),但随着MBE和RMSE分别降低0.5和0.5,预测误差得到改善LAI同化分别为Mgha〜(-1),而土壤水分同化分别降低1.8和1.1Mgha〜(-1)。当土壤水分和LAI均同化时,产量相关性进一步改善(R = 0.65),表明土壤水分和LAI之间存在因果关系,相对于开放,预测误差(MBE和RMSE)也分别降低了1.7和1.8Mgha-1。循环仿真。结果表明,当条件非常潮湿时,单独吸收LAI可能更可取;而当条件更为正常时,土壤水分+ LAI的吸收可能更合适。在高植被的情况下(即农作物充分生长时),AMSR-E土壤水分趋向于更加有偏见,并且在非常潮湿的条件下通过近地表土壤水分同化来更新根区土壤水分可能会增加模拟渗流,从而导致过量氮(N)浸出,因此即使由于土壤水分吸收而使水分胁迫最小化,也降低了农作物的产量。但是,通过考虑生长季节预期的气候条件的先验信息,策略性地应用数据同化-作物建模框架可以显着提高产量预测性能,在我们的情况下,相关性更高(R = 0.80),MBE和RMSE降低更多(2.5和3.3Mgha〜(-1))与没有数据同化时相比。将AMSR-E土壤湿度缩放到模型的气候条件并不能改善我们的数据同化结果,因为该模型也存在偏差。更好的土壤水分产品,例如通过土壤水分主动被动(SMAP)任务,可以在不久的将来解决土壤水分数据问题。

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