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Cellular resolution in clinical MALDI mass spectrometry imaging: the latest advancements and current challenges

机译:临床马尔迪质谱成像中的细胞分辨率:最新的进步和当前挑战

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摘要

Mass spectrometry (MS) is the workhorse of metabolomics, proteomics and lipidomics. Mass spectrometry imaging (MSI), its extension to spatially resolved analysis of tissues, is a powerful tool for visualizing molecular information within the histological context of tissue. This review summarizes recent developments in MSI and highlights current challenges that remain to achieve molecular imaging at the cellular level of clinical specimens. We focus on matrix-assisted laser desorption/ionization (MALDI)-MSI. We discuss the current status of each of the analysis steps and remaining challenges to reach the desired level of cellular imaging. Currently, analyte delocalization and degradation, matrix crystal size, laser focus restrictions and detector sensitivity are factors that are limiting spatial resolution. New sample preparation devices and laser optic systems are being developed to push the boundaries of these limitations. Furthermore, we review the processing of cellular MSI data and images, and the systematic integration of these data in the light of available algorithms and databases. We discuss roadblocks in the data analysis pipeline and show how technology from other fields can be used to overcome these. Finally, we conclude with curative and community efforts that are needed to enable contextualization of the information obtained.
机译:质谱(MS)是代谢组科,蛋白质组学和脂类学的主致讲话。质谱成像(MSI),其在空间解决的组织分析分析的延伸,是用于在组织的组织学背景下可视化分子信息的强大工具。本综述总结了MSI中最近的发展,并突出了当前在临床标本细胞水平下剩余分子成像的挑战。我们专注于矩阵辅助激光解吸/电离(MALDI)-MSI。我们讨论每个分析步骤的当前状态,并留下致密的挑战,以达到所需的蜂窝成像水平。目前,分析物删除和降解,矩阵晶体尺寸,激光焦点限制和检测器灵敏度是限制空间分辨率的因素。正在开发出新的样品制备装置和激光光学系统以推动这些限制的边界。此外,我们审查蜂窝MSI数据和图像的处理,以及根据可用算法和数据库的这些数据的系统集成。我们讨论数据分析管道中的障碍,并展示如何使用其他字段的技术来克服这些。最后,我们得出了掌握和社区努力,以实现所获得的信息的上下文化。

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