首页> 外国专利> Method of whole-genome sequencing

Method of whole-genome sequencing

机译:全基因组测序方法

摘要

A whole-genome sequencing method, including: 1) extracting a whole-genome DNA and constructing a BAC library; 2) constructing mixing pools; 3) extracting DNA of the mixing pools; 4) performing pair-end sequencing for the DNA from the mixing pools; 5) scanning sequences of each mixing pool to obtain a feature sequence set and a k-mer set of each mixing pool; 6) analyzing a corresponding feature sequence set and a corresponding k-mer set of each clone; 7) constructing clone contigs; 8) dividing the k-mer sets of the clones into small k-mer sets and positioning the small k-mer sets; 9) assembling the NGS sequences to yield sequence contigs; 10) positioning the sequence contigs, connecting the sequence contigs and determining directions thereof; and 11) determining relative positions and directions of the clone contigs, and connecting the sequences of clone contigs as whole stripe of chromosome sequences.
机译:一种全基因组测序方法,包括:1)提取全基因组DNA并构建BAC文库; 2)建设混合池; 3)提取混合池的DNA; 4)对混合池中的DNA进行双末端测序; 5)扫描每个混合池的序列以获得每个混合池的特征序列集和k聚体集; 6)分析每个克隆的相应特征序列集和相应的k聚体集; 7)构建克隆重叠群; 8)将克隆的k聚体集合分成小k聚体集合并定位小k聚体集合; 9)组装NGS序列以产生序列重叠群; 10)定位序列重叠群,连接序列重叠群并确定其方向; 11)确定克隆重叠群的相对位置和方向,并将克隆重叠群的序列连接为染色体序列的整个条带。

著录项

  • 公开/公告号US10378052B2

    专利类型

  • 公开/公告日2019-08-13

    原文格式PDF

  • 申请/专利权人 HUAZHONG AGRICULTURAL UNIVERSITY;

    申请/专利号US201614990825

  • 发明设计人 MEIZHONG LUO;YONGLONG PAN;

    申请日2016-01-08

  • 分类号G01N33/48;C12Q1/6874;C12Q1/6806;G16B30;

  • 国家 US

  • 入库时间 2022-08-21 12:16:38

相似文献

  • 专利
  • 外文文献
  • 中文文献
获取专利

客服邮箱:kefu@zhangqiaokeyan.com

京公网安备:11010802029741号 ICP备案号:京ICP备15016152号-6 六维联合信息科技 (北京) 有限公司©版权所有
  • 客服微信

  • 服务号