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Single-cell characterization of metabolic switching in the sugar phosphotransferase system of Escherichia coli

机译:大肠杆菌糖磷酸转移酶系统中代谢转换的单细胞表征

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摘要

The utilization of several sugars in Escherichia coli is regulated by the Phosphotransferase System (PTS), in which diverse sugar utilization modules compete for phosphoryl flux from the general PTS proteins. Existing theoretical work predicts a winner-take-all outcome when this flux limits carbon uptake. To date, no experimental work has interrogated competing PTS uptake modules with single-cell resolution. Using time-lapse microscopy in perfused microchannels, we analyzed the competition between N-acetyl-glucosamine and sorbitol, as representative PTS sugars, by measuring both the expression of their utilization systems and the concomitant impact of sugar utilization on growth rates. We find two distinct regimes: hierarchical usage of the carbohydrates, and co-expression of the genes for both systems. Simulations of a mathematical model incorporating asymmetric sugar quality reproduce our metabolic phase diagram, indicating that under conditions of nonlimiting phosphate flux, co-expression is due to uncoupling of both sugar utilization systems. Our model reproduces hierarchical winner-take-all behaviour and stochastic co-expression, and predicts the switching between both strategies as a function of available phosphate flux. Hence, experiments and theory both suggest that PTS sugar utilization involves not only switching between the sugars utilized but also switching of utilization strategies to accommodate prevailing environmental conditions.
机译:大肠杆菌中几种糖的利用受磷酸转移酶系统(PTS)的调节,在该系统中,多种糖利用模块竞争来自普通PTS蛋白的磷酸通量。现有的理论工作预测,当这种通量限制碳的吸收时,赢家通吃的结果。迄今为止,还没有任何实验工作询问具有单细胞分辨率的竞争性PTS摄取模块。通过在灌注微通道中使用延时显微镜,我们通过测量N-乙酰氨基葡萄糖和山梨糖醇(代表PTS糖)之间的竞争,分析了其利用系统的表达以及糖利用对增长率的伴随影响。我们发现了两种不同的方案:碳水化合物的分级使用以及两个系统的基因共表达。包含不对称糖质量的数学模型的模拟重现了我们的代谢相图,表明在非限制性磷酸盐通量的条件下,共表达是由于两个糖利用系统的解偶联所致。我们的模型再现了分层的赢家通吃的行为和随机共表达,并预测了这两种策略之间的切换(取决于可用的磷酸盐通量)。因此,实验和理论均表明,PTS糖的利用不仅涉及所利用的糖之间的转换,而且还涉及适应主要环境条件的利用策略的转换。

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