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Draft genome sequence and genetictransformation of the oleaginous algaNannochloropis gaditana

机译:含油藻的基因组草图和遗传转化

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摘要

The potential use of algae in biofuels applications is receiving significant attention. However,none of the current algal model species are competitive production strains. Here we presenta draft genome sequence and a genetic transformation method for the marine microalgaNannochloropsis gaditana CCmP526. We show that N. gaditana has highly favourable lipid yields,and is a promising production organism. The genome assembly includes nuclear (~29 mb)and organellar genomes, and contains 9,052 gene models. We define the genes required forglycerolipid biogenesis and detail the differential regulation of genes during nitrogen-limitedlipid biosynthesis. Phylogenomic analysis identifies genetic attributes of this organism,including unique stramenopile photosynthesis genes and gene expansions that may explain thedistinguishing photoautotrophic phenotypes observed. The availability of a genome sequenceand transformation methods will facilitate investigations into N. gaditana lipid biosynthesis andpermit genetic engineering strategies to further improve this naturally productive alga.
机译:藻类在生物燃料应用中的潜在用途正受到广泛关注。但是,当前的藻类模型物种都不是竞争性生产菌株。在这里,我们介绍了海洋微藻Nannochloropsis gaditana CCmP526的基因组序列草案和遗传转化方法。我们表明加迪纳猪笼草具有很高的脂质产量,是一种很有前途的生产生物。基因组组装包括核基因组(〜29 mb)和细胞器基因组,并包含9,052个基因模型。我们定义了甘油脂生物发生所需的基因,并详细介绍了氮受限脂质生物合成过程中基因的差异调控。系统生物学分析确定了该生物的遗传属性,包括独特的Stramenopile光合作用基因和基因扩展,这可能解释了所观察到的不同的光合自养表型。基因组序列和转化方法的可用性将促进对加迪纳猪笼草脂质生物合成的研究,并允许进行基因工程策略以进一步改善这种天然生产的藻类。

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