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Effects of incorporating the additive relationship on REML estimates of heritability, for grain yield in soybean [Glycine max (L.) Merr.]

机译:大豆中谷物产量的累加关系对REML遗传力估计的影响[Glycine max(L.)Merr。]

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The goal of this research was to analyses the effect of the inclusion of the additive relationship matrix A in the genetic evaluation of progenitors of soybean varieties using mixed linear models. More specifically, we analysed the effects of including A in: i) the restricted maximum likelihood estimation (REML) estimates of the variance components and in ii) the asymptotic variances of REML estimates. Data used in the study were obtained from the national trials network where 39 genotypes were evaluated during 4 years in 15 locations. Estimate of heritability (h~2) by REML was higher using the A matrix (h~2 = 0.15 +- 0.0241) than excluding A from the analysis (h~2 = 0.09 +- 0.0185). Similarly, when A was considered in the model, the coefficient of variation of REML estimate of the additive variance was smaller, compared with the coefficient obtained when the additive relationships were excluded in the analysis (18 to 22). Furthermore, including A in the model reduced the magnitude of the correlation between the REML estimates of the additive variance and the error variances, -0.01 to -0.07, thus improving the accuracy of estimation for both parameters. Finally, breeding values predicted by mixed models resulted in a 21 percent improvement of the Spearman-rank-correlation between the mating rankings predicted by BLUP with the observed rankings at the end of the breeding program, when compared with the same correlation using breeding values predicted by the parents mean value.
机译:这项研究的目的是使用混合线性模型分析在大豆品种的祖先的遗传评估中添加关系矩阵A的影响。更具体地说,我们分析了将A包括在内的影响:i)方差分量的受限最大似然估计(REML)估计,以及ii)REML估计的渐近方差。该研究中使用的数据来自国家试验网络,该网络在4年中的15个地点评估了39种基因型。使用A矩阵(h〜2 = 0.15 +-0.0241)通过REML估计的遗传力(h〜2)高于分析中排除的A(h〜2 = 0.09 +-0.0185)。类似地,当在模型中考虑A时,相较于在分析中未考虑相加关系时获得的系数,REML估算相加方差的REML变异系数较小(18至22)。此外,在模型中包含A可以减小累加方差和误差方差的REML估计值之间的相关度-0.01至-0.07,从而提高两个参数的估计精度。最后,与使用繁殖值预测的相同相关性相比,混合模型预测的育种值使BLUP预测的交配排名与观察到的排名在育种程序结束时的Spearman等级相关性提高了21%。由父母的中值。

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