A model of key residues interactions for HPVs E1 DNA binding domain-DNA interface based on HPVs residues conservation profiles and molecular dynamics simulations

da Silva Neto Antonio Marinho; Montalvao Rinaldo Wander; Gondim Martins Danyelly Bruneska; de Lima Filho Jose Luiz; Madeiros Castelletti Carlos Henrique

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A model of key residues interactions for HPVs E1 DNA binding domain-DNA interface based on HPVs residues conservation profiles and molecular dynamics simulations

机译：基于HPVS残留算子和分子动力学模拟的HPVS E1 DNA结合结构域-DNA接口的关键残留型相互作用模型及分子动力学模拟

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来源
《Journal of Biomolecular Structure and Dynamics》 |2020年第12期|共10页
作者
da Silva Neto Antonio Marinho; Montalvao Rinaldo Wander; Gondim Martins Danyelly Bruneska; de Lima Filho Jose Luiz; Madeiros Castelletti Carlos Henrique;
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作者单位

Univ Sao Paulo Sao Carlos Inst Phys Sao Carlos SP Brazil;

Univ Sao Paulo Sao Carlos Inst Phys Sao Carlos SP Brazil;

Univ Fed Pernambuco Lab Keizo Asami Immunopathol Recife PE Brazil;

Univ Fed Pernambuco Lab Keizo Asami Immunopathol Recife PE Brazil;

Univ Fed Pernambuco Lab Keizo Asami Immunopathol Recife PE Brazil;

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原文格式 PDF
正文语种 eng
中图分类分子生物学;
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专利

1. A model of key residues interactions for HPVs E1 DNA binding domain-DNA interface based on HPVs residues conservation profiles and molecular dynamics simulations [J] . da Silva Neto Antonio Marinho, Montalvao Rinaldo Wander, Gondim Martins Danyelly Bruneska, Journal of Biomolecular Structure and Dynamics . 2020,第11a12期

机译：基于HPVS残留算子和分子动力学模拟的HPVS E1 DNA结合结构域-DNA接口的关键残留型相互作用模型及分子动力学模拟
2. Molecular dynamics simulations revealed structural differences among WRKY domain-DNA interaction in barley ( Hordeum vulgare ) [J] . Bharati Pandey, Abhinav Grover, Pradeep Sharma BMC Genomics . 2018,第1期

机译：分子动力学模拟显示大麦（大麦）的WRKY域-DNA相互作用之间的结构差异
3. Molecular dynamics simulations and modelling of the residue interaction networks in the BRAF kinase complexes with small molecule inhibitors: probing the allosteric effects of ligand-induced kinase dimerization and paradoxical activation [J] . G. M. Verkhivker Molecular BioSystems . 2016,第10期

机译：带有小分子抑制剂的BRAF激酶复合物中的残基相互作用网络的分子动力学模拟和建模：探讨配体诱导的激酶二聚化和反常激活的变构作用
4. FRAGMENT-BASED DESIGN OF NOVEL INHIBITORS OF HPV 16 E6 ONCOPROTEIN:MOLECULAR DOCKING,MOLECULAR DYNAMICS SIMULATION AND IN SILICO ADME ANALYSIS [C] . A.Kumar, E.Rathi, S.G.Kini Conference on Drug Design and Discovery Technologies . 2020

机译：基于片段的HPV 16 E6癌蛋白的新型抑制剂设计：分子对接，分子动力学模拟和硅Adme分析
5. Identification of interface residues involved in protein-protein and protein-DNA interactions from sequence using machine learning approaches. [D] . Yan, Changhui. 2005

机译：使用机器学习方法从序列中识别参与蛋白质-蛋白质和蛋白质-DNA相互作用的界面残基。
6. Molecular dynamics simulations revealed structural differences among WRKY domain-DNA interaction in barley (Hordeum vulgare) [O] . Bharati Pandey, Abhinav Grover, Pradeep Sharma 2018

机译：分子动力学模拟揭示了大麦（大麦）中WRKY域-DNA相互作用之间的结构差异
7. Molecular dynamics simulations revealed structural differences among WRKY domain-DNA interaction in barley (Hordeum vulgare) [O] . Bharati Pandey, Abhinav Grover, Pradeep Sharma 2018

机译：分子动力学模拟在大麦（Hordeum Vulgare）中的Wrky Domain-DNA相互作用揭示了结构差异

A model of key residues interactions for HPVs E1 DNA binding domain-DNA interface based on HPVs residues conservation profiles and molecular dynamics simulations

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