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Molecular function predictions and diagnostic value analysis of plasma exosomal miRNAs in Hirschsprung's disease

机译:Hirschsprung病中血浆外泌体MiRNA的分子功能预测与诊断价值分析

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摘要

Aim: To discover the potential roles of plasma exosomal miRNAs in Hirschsprung's disease (HSCR) and identify potential noninvasive biomarkers for early diagnosis of HSCR. Materials & methods: Plasma samples were collected from HSCR patients and matched controls. Exosomes were isolated before high-throughput Illumina sequencing was utilized to gain a profile of dysregulated exosomal miRNAs, followed with further verification in two separate cohorts. Bioinformatics analyses were also adopted to explore the molecular functions of dysregulated miRNAs in Hirschsprung's disease. Results & conclusion: 31 dysregulated miRNAs were identified with five considered as promising HSCR signatures. Gene enrichment analysis disclosed that the upregulated miRNAs were most likely to participate in 'extracellular matrix-receptor interaction' and contribute to HSCR through interfering in cell junctions.
机译:目的:发现血浆外泌体miRNA在Hirschsprung氏病(HSCR)中的潜在作用,并确定潜在的非侵入性生物标志物,用于早期诊断HSCR。 材料和方法:从HCSCR患者和匹配对照中收集等离子体样品。 在利用高通量的illumina测序之前分离出外泌体以获得多发性外泌体miRNA的剖面,然后在两个单独的队列中进行进一步验证。 还采用了生物信息学分析来探讨Hirschsprung病中失调MiRNA的分子功能。 结果与结论:鉴定了31种失调的miRNA,其中五种被认为是具有承诺的HSCR签名。 基因富集分析公开了上调的miRNA最有可能参与“细胞外基质 - 受体相互作用”,并通过干扰细胞连接来促进HSCR。

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  • 来源
    《Epigenomics》 |2020年第5期|共14页
  • 作者单位

    Nanjing Med Univ Dept Pediat Surg Childrens Hosp Nanjing Peoples R China;

    Nanjing Med Univ Dept Pediat Surg Childrens Hosp Nanjing Peoples R China;

    Nanjing Med Univ Dept Pediat Surg Childrens Hosp Nanjing Peoples R China;

    Nanjing Med Univ Dept Pediat Surg Childrens Hosp Nanjing Peoples R China;

    Nanjing Med Univ Dept Pediat Surg Childrens Hosp Nanjing Peoples R China;

    Nanjing Med Univ Dept Pediat Surg Childrens Hosp Nanjing Peoples R China;

    Nanjing Med Univ Dept Pediat Surg Childrens Hosp Nanjing Peoples R China;

  • 收录信息
  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类 遗传学;
  • 关键词

    biomarker; ECM; gene enrichment; Hirschsprung's disease; KEGG; miRNA; plasma exosomes;

    机译:生物标志物;ECM;基因浓缩;Hirschsprung的疾病;Kegg;miRNA;血浆外来血浆;

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