...
首页> 外文期刊>The Journal of Chemical Physics >A smooth, nonsingular, and faithful discretization scheme for polarizable continuum models: The switching/Gaussian approach
【24h】

A smooth, nonsingular, and faithful discretization scheme for polarizable continuum models: The switching/Gaussian approach

机译:可极化连续体模型的平滑,非奇异和忠实的离散化方案:切换/高斯方法

获取原文
获取原文并翻译 | 示例
           

摘要

Polarizable continuum models (PCMs) are a widely used family of implicit solvent models based on reaction-field theory and boundary-element discretization of the solute/continuum interface. An often overlooked aspect of these theories is that discretization of the interface typically does not afford a continuous potential energy surface for the solute. In addition, we show that discretization can lead to numerical singularities and violations of exact variational conditions. To fix these problems, we introduce the switching/Gaussian (SWIG) method, a discretization scheme that overcomes several longstanding problems with PCMs. Our approach generalizes a procedure introduced by York and Karplus [J. Phys. Chem. A 103, 11060 (1999)], extending it beyond the conductor-like screening model. Comparison to other purportedly smooth PCM implementations reveals certain artifacts in these alternative approaches, which are avoided using the SWIG methodology. The versatility of our approach is demonstrated via geometry optimizations, vibrational frequency calculations, and molecular dynamics simulations, for solutes described using quantum mechanics and molecular mechanics.
机译:可极化连续体模型(PCM)是基于反应场理论和溶质/连续体界面的边界元素离散化而广泛使用的隐式溶剂模型系列。这些理论的一个经常被忽视的方面是,界面的离散化通常不会为溶质提供连续的势能表面。此外,我们表明离散化可能导致数值奇异和违反精确的变分条件。为了解决这些问题,我们引入了开关/高斯(SWIG)方法,该方法是一种克服了PCM长期存在的问题的离散化方案。我们的方法概括了约克和卡普拉斯[J.物理化学103,11060(1999)],将其扩展到类似导体的屏蔽模型之外。与其他据说平滑的PCM实现方案的比较揭示了这些替代方法中的某些瑕疵,可以使用SWIG方法避免这些瑕疵。通过几何优化,振动频率计算和分子动力学模拟,证明了我们方法的多功能性,适用于使用量子力学和分子力学描述的溶质。

著录项

相似文献

  • 外文文献
  • 中文文献
  • 专利
获取原文

客服邮箱:kefu@zhangqiaokeyan.com

京公网安备:11010802029741号 ICP备案号:京ICP备15016152号-6 六维联合信息科技 (北京) 有限公司©版权所有
  • 客服微信

  • 服务号