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Icarus: visualizer for de novo assembly evaluation

机译:伊卡洛斯(Icarus):可视化器,用于从头组装评估

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摘要

Data visualization plays an increasingly important role in NGS data analysis. With advances in both sequencing and computational technologies, it has become a new bottleneck in genomics studies. Indeed, evaluation of de novo genome assemblies is one of the areas that can benefit from the visualization. However, even though multiple quality assessment methods are now available, existing visualization tools are hardly suitable for this purpose. Here, we present Icarus-a novel genome visualizer for accurate assessment and analysis of genomic draft assemblies, which is based on the tool QUAST. Icarus can be used in studies where a related reference genome is available, as well as for non-model organisms. The tool is available online and as a standalone application.
机译:数据可视化在NGS数据分析中扮演着越来越重要的角色。随着测序和计算技术的进步,它已成为基因组学研究的新瓶颈。实际上,从头评估基因组组装是可从可视化中受益的领域之一。但是,即使现在有多种质量评估方法,现有的可视化工具也很难满足此目的。在这里,我们介绍基于工具QUAST的Icarus-一种新颖的基因组可视化工具,用于准确评估和分析基因组草图。伊卡洛斯可用于可获得相关参考基因组的研究以及非模型生物。该工具可以在线使用,也可以作为独立应用程序使用。

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