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On distributed memory MPI-based parallelization of SPH codes in massive HPC context

机译:大规模HPC上下文中基于分布式内存MPI的SPH代码并行化

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Most of particle methods share the problem of high computational cost and in order to satisfy the demands of solvers, currently available hardware technologies must be fully exploited. Two complementary technologies are now accessible. On the one hand, CPUs which can be structured into a multi-node framework, allowing massive data exchanges through a high speed network. In this case, each node is usually comprised of several cores available to perform multithreaded computations. On the other hand, GPUs which are derived from the graphics computing technologies, able to perform highly multithreaded calculations with hundreds of independent threads connected together through a common shared memory. This paper is primarily dedicated to the distributed memory parallelization of particle methods, targeting several thousands of CPU cores. The experience gained clearly shows that parallelizing a particle-based code on moderate numbers of cores can easily lead to an acceptable scalability, whilst a scalable speedup on thousands of cores is much more difficult to obtain. The discussion revolves around speeding up particle methods as a whole, in a massive HPC context by making use of the MPI library. We focus on one particular particle method which is Smoothed Particle Hydrodynamics (SPH), one of the most widespread today in the literature as well as in engineering. (C) 2015 Published by Elsevier B.V.
机译:大多数粒子方法都存在计算成本高的问题,并且为了满足求解器的需求,必须充分利用当前可用的硬件技术。现在可以使用两种互补技术。一方面,CPU可以被构造为多节点框架,从而可以通过高速网络进行大量数据交换。在这种情况下,每个节点通常由几个可用于执行多线程计算的内核组成。另一方面,源自图形计算技术的GPU能够执行高度多线程的计算,其中数百个独立线程通过公共共享内存连接在一起。本文主要致力于粒子方法的分布式内存并行化,目标是数千个CPU内核。所获得的经验清楚地表明,在中等数量的内核上并行执行基于粒子的代码很容易导致可接受的可伸缩性,而在数千个内核上进行可伸缩的加速则更加困难。讨论围绕通过使用MPI库在大规模HPC环境中整体上加速粒子方法而进行。我们关注一种特殊的粒子方法,即平滑粒子流体动力学(SPH),这是当今文献和工程领域中最广泛使用的方法之一。 (C)2015由Elsevier B.V.发布

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