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首页> 外文期刊>Journal of the American Society for Horticultural Science >Molecular Genetic Variability of Spigelia marilandica and S. gentianoides
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Molecular Genetic Variability of Spigelia marilandica and S. gentianoides

机译:螺旋藻和龙胆沙门氏菌的分子遗传变异

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Despite the ecologic and ornamental potential of southeastern U.S. native Spigelia, little is known about the intraspecific or the interpopulation genetic variation. The southeastern U.S. native Spigelia habitat is becoming more and more fragmented as a result of human activity, making it imperative to gain an understanding of natural genetic variation among and within species and populations for the purpose of obtaining variability for plant breeding and preserve the genetic variability in Spigelia. Therefore, the objective of this study was to use amplified fragment length polymorphism analysis to determine interspecific and intraspecific genetic variation and to evaluate gene flow. Thirteen populations of two species of native Spigelia, S. marilandica (SM), S. gentianoides var. gentianoides (SGG), and S. gentianoides var. alabamensis (SGA), were analyzed using four primer pairs that amplified a total of 269 bands. Based on analysis of molecular variance and estimates of Nei's coefficients of gene diversity (percentage of polymorphic loci, average genetic diversity within populations, average genetic diversity within species, and proportion of species genetic diversity attributed to among population variation), the majority of variation found in Spigelia occurs within populations. Both among-species and among-population variation was low, likely the effect of common ancestry as well as relatively frequent introgression among individuals (and populations) of Spigelia. When all individuals were evaluated using Nei's unbiased genetic distances and viewed as a unweighted pair group method with arithmetic mean phenogram, three main groups were shown, one with two samples of SGG from one population, one with 13 individuals from both SGG populations used in this study, and one with all of the SM, SGA, and remaining SGG individuals. Further evaluation using STRUCTURE software showed introgression between populations and species, although all allele clusters have not entirely introgressed into all populations. The significance of these results is discussed in relation to breeding in Spigelia.
机译:尽管美国东南部本地Spigelia具有生态和观赏潜力,但对种内或种群间遗传变异知之甚少。人类活动的结果是,美国东南部的Spigelia原始栖息地变得越来越零散,因此必须了解物种和种群之间和内部的自然遗传变异,以获取植物育种的变异性并保存遗传变异性。在Spigelia。因此,本研究的目的是使用扩增的片段长度多态性分析来确定种间和种内遗传变异并评估基因流。两种原生Spigelia,S。marilandica(SM),S。gentianoides var的13个种群。 gentianoides(SGG)和S. gentianoides var。使用四个引物对分析了阿拉巴马州(SGA),共扩增了269条条带。根据分子方差分析和Nei基因多样性系数的估计(多态性位点的百分比,种群内平均遗传多样性,物种内平均遗传多样性以及种群变异中物种遗传多样性的比例),发现了大多数变异在Spigelia中发生于种群内。物种间和种群间的变异均较低,很可能是共同血统的影响,以及Spigelia的个体(和种群)之间相对频繁的渗入。当使用Nei的无偏遗传距离评估所有个体并将其视为具有算术平均象形图的非加权成对组方法时,显示了三个主要组,其中一个来自一个种群的两个SGG样本,一个带有两个种群的13个个体的SGG样本。研究,以及所有SM,SGA和其余SGG个人。使用STRUCTURE软件进行的进一步评估显示种群和物种之间存在渗入,尽管所有等位基因簇尚未完全渗入所有种群。讨论了这些结果与在Spigelia中育种有关的意义。

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