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首页> 外文期刊>Journal of proteome research >In search of secreted protein biomarkers for the anti-inflammatory effect of beta2-adrenergic receptor agonists: application of DIGE technology in combination with multivariate and univariate data analysis tools.
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In search of secreted protein biomarkers for the anti-inflammatory effect of beta2-adrenergic receptor agonists: application of DIGE technology in combination with multivariate and univariate data analysis tools.

机译:寻找分泌蛋白的生物标志物,以了解β2-肾上腺素能受体激动剂的抗炎作用:将DIGE技术与多变量和单变量数据分析工具结合使用。

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Two-dimensional difference gel electrophoresis (DIGE) in combination with univariate (Student's t-test) and multivariate data analysis, principal component analysis (PCA) and partial least squares discriminant analysis (PLS-DA) were used to study the anti-inflammatory effects of the beta(2)-adrenergic receptor (beta(2)-AR) agonist zilpaterol. U937 macrophages were exposed to the endotoxin lipopolysaccharide (LPS) to induce an inflammatory reaction, which was inhibited by the addition of zilpaterol (LZ). This inhibition was counteracted by addition of the beta(2)-AR antagonist propranolol (LZP). The extracellular proteome of the U937 cells induced by the three treatments were examined by DIGE. PCA was used as an explorative tool to investigate the clustering of the proteome dataset. Using this tool, the dataset obtained from cells treated with LPS and LZP were separated from those obtained from LZ treated cells. PLS-DA, a multivariate data analysis tool that also takes correlations between protein spotsand class assignment into account, correctly classified the different extracellular proteomes and showed that many proteins were differentially expressed between the proteome of inflamed cells (LPS and LZP) and cells in which the inflammatory response was inhibited (LZ). The Student's t-test revealed 8 potential protein biomarkers, each of which was expressed at a similar level in the LPS and LZP treated cells, but differently expressed in the LZ treated cells. Two of the identified proteins, macrophage inflammatory protein-1beta (MIP-1beta) and macrophage inflammatory protein-1alpha (MIP-1alpha) are known secreted proteins. The inhibition of MIP-1beta by zilpaterol and the involvement of the beta(2)-AR and cAMP were confirmed using a specific immunoassay.
机译:二维差异凝胶电泳(DIGE)结合单变量(Student's t检验)和多变量数据分析,主成分分析(PCA)和偏最小二乘判别分析(PLS-DA)用于研究抗炎作用β(2)-肾上腺素能受体(β(2)-AR)激动剂齐帕特罗。将U937巨噬细胞暴露于内毒素脂多糖(LPS)以诱导炎症反应,该反应可通过添加齐帕特罗(LZ)来抑制。通过添加β(2)-AR拮抗剂普萘洛尔(LZP)抵消了这种抑制作用。通过DIGE检查通过三种处理诱导的U937细胞的细胞外蛋白质组。 PCA用作研究蛋白质组数据集聚类的探索工具。使用此工具,将从LPS和LZP处理过的细胞获得的数据集与从LZ处理过的细胞获得的数据集分离。 PLS-DA是一种多变量数据分析工具,它也考虑了蛋白质斑点和类别分配之间的相关性,正确分类了不同的细胞外蛋白质组,并显示了发炎细胞(LPS和LZP)蛋白质组和其中炎症反应被抑制(LZ)。学生t检验显示了8种潜在的蛋白质生物标志物,每种蛋白质标志物在LPS和LZP处理的细胞中以相似的水平表达,但在LZ处理的细胞中以不同的水平表达。鉴定出的两种蛋白质是巨噬细胞炎性蛋白1beta(MIP-1beta)和巨噬细胞炎性蛋白1alpha(MIP-1alpha)。齐帕特罗对MIP-1beta的抑制作用以及β(2)-AR和cAMP的参与均通过特异性免疫测定得以证实。

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