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首页> 外文期刊>Diseases of Aquatic Organisms >Validation of a quantitative PCR diagnostic method for detection of the microsporidian Ovipleistophora ovariae in the cyprinid fish Notemigonus crysoleucas
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Validation of a quantitative PCR diagnostic method for detection of the microsporidian Ovipleistophora ovariae in the cyprinid fish Notemigonus crysoleucas

机译:定量PCR诊断方法在塞浦路斯鱼类Notemigonus crysoleucas中检测微孢子虫卵形卵菌的验证

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Microsporidian parasites are easily detected by light microscopy when infections are heavy and spores are present. However, early infections without spores, or light infections with low numbers of spores, are easily missed. This limitation has made it difficult to conduct investigations into microsporidian prevalence and transmission. In this study, we developed a quantitative TaqMan polymerase chain reaction assay to assess the presence of Ovipleistophora ovariae in the tissues of the cyprinid fish Notemigonus crysoleucas (golden shiner). The efficiency of the primer set was 100.8%, with a correlation coefficient of threshold position to copy number of 0.997 over 9 logs using a plasmid containing the cloned reaction product. No product was produced from other closely related microsporidian species (Nucleospora salmonis, Pseudoloma neurophila, Glugea stephani, Heterosporis sp., and O. mirandella). The coefficient of variation for replicate assays done on different days was 12.4%. The assay detects O. ovariae reliably at less than 10 genomic copies and 0.14 spores per reaction, but maximum sensitivity is only achieved when sonication is included as part of the DNA purification step. Using the assay, we found 4.44 x 10 super(1) to 7.91 x 10 super(6) copies 渭g super(-1) host DNA in female golden shiners, with the spore density increasing during the spawning season. The parasite was also detected for the first time in the testes of male golden shiners at 2.60 x 10 super(1) to 8.62 x 10 super(2) copies 渭g super(-1) host DNA.
机译:当感染很重并且有孢子存在时,通过光学显微镜很容易检测到微孢子虫寄生虫。但是,很容易错过没有孢子的早期感染或孢子数量少的轻度感染。这种局限性使得很难对微孢子虫的流行和传播进行调查。在这项研究中,我们开发了定量的TaqMan聚合酶链反应测定法,以评估在塞浦路斯鱼类Notemigonus crysoleucas(金光)中组织中Ovipleistophora ovariae的存在。使用含有克隆的反应产物的质粒,引物组的效率为100.8%,在9个对数上,阈值位置与拷贝数的相关系数为0.997。没有其他密切相关的微孢子虫物种(鲑鱼核孢菌,神经假单胞菌,斯蒂芬尼氏菌,杂孢子虫和米兰德勒菌)生产任何产品。在不同天进行的重复测定的变异系数为12.4%。该测定法能够可靠地以少于10个基因组拷贝和0.14个孢子的量检测到卵巢曲霉,但只有在DNA纯化步骤中包括超声处理时才能实现最大的灵敏度。使用该测定法,我们发现雌性金色光泽中的4.44 x 10超级(1)至7.91 x 10超级(6)拷贝μg超级(-1)宿主DNA,在产卵季节孢子密度增加。还首次在雄性金光闪耀的睾丸中以2.60 x 10 super(1)至8.62 x 10 super(2)拷贝μgsuper(-1)宿主DNA检测到该寄生虫。

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