首页> 外文期刊>Carbohydrate research >A 3D-structural model of unsulfated chondroitin from high-field NMR: 4-sulfation has little effect on backbone conformation
【24h】

A 3D-structural model of unsulfated chondroitin from high-field NMR: 4-sulfation has little effect on backbone conformation

机译:来自高场NMR的未硫酸化软骨素的3D结构模型:4-硫酸化对骨架构象影响很小

获取原文
获取原文并翻译 | 示例
           

摘要

The glycosaminoglycan chondroitin sulfate is essential in human health and disease but exactly how sulfation dictates its 3D-strucutre at the atomic level is unclear. To address this, we have purified homogenous oligosaccharides of unsulfated chondroitin (with and without N-15-enrichment) and analysed them by high-field NMR to make a comparison published chondroitin sulfate and hyaluronan 3D-structures. The result is the first full assignment of the tetrasaccharide and an experimental 3D-model of the hexasaccharide (PDB code 2KQO). In common with hyaluronan, we confirm that the amide proton is not involved in strong, persistent inter-residue hydrogen bonds. However, in contrast to hyaluronan, a hydrogen bond is not inferred between the hexosamine OH-4 and the glucuronic acid 05 atoms across the beta(1 -> 3) glycosidic linkage. The unsulfated chondroitin bond geometry differs slightly from hyaluronan y rotation about the beta(1 -> 3) psi dihedral (as previously predicted by simulation), while the beta(1 -> 4) linkage is unaffected. Furthermore, comparison shows that this glycosidic linkage geometry is similar in chondroitin-4-sulfate. We therefore hypothesise that both hexosamine OH-4 and OH-6 atoms are solvent exposed in chondroitin, explaining why it is amenable to sulfation and hyaluronan is not, and also that 4-sulfation has little effect on backbone conformation. Our conclusions exemplify the value of the 3D-model presented here and progress our understanding of glycosaminoglycan molecular properties.
机译:糖胺聚糖软骨素硫酸盐对人类健康和疾病至关重要,但目前尚不清楚硫酸化如何在原子水平上决定其3D结构。为了解决这个问题,我们纯化了未硫酸化软骨素(有和没有N-15富集)的均质寡糖,并通过高场NMR对其进行了分析,以比较硫酸软骨素和透明质酸3D结构。结果是四糖的首次完整分配和六糖的实验3D模型(PDB代码2KQO)。与乙酰透明质酸一样,我们确认酰胺质子不参与强而持​​久的残基间氢键。但是,与透明质酸相反,在六胺OH-4和葡萄糖醛酸05原子之间的β(1-> 3)糖苷键上未发现氢键。未硫酸化软骨素键的几何形状与透明质酸绕β(1-> 3)psi二面体的旋转略有不同(如先前通过模拟所预测的),而β(1-> 4)键不受影响。此外,比较显示该糖苷键的几何形状在硫酸4-硫酸软骨素中相似。因此,我们假设六胺OH-4和OH-6原子都暴露在软骨素中,这解释了为何硫酸铵适合硫酸盐化,而透明质酸却不适合硫酸盐化,并且4-硫酸盐化对骨架构象的影响很小。我们的结论证明了此处介绍的3D模型的价值,并增进了我们对糖胺聚糖分子特性的理解。

著录项

相似文献

  • 外文文献
  • 中文文献
  • 专利
获取原文

客服邮箱:kefu@zhangqiaokeyan.com

京公网安备:11010802029741号 ICP备案号:京ICP备15016152号-6 六维联合信息科技 (北京) 有限公司©版权所有
  • 客服微信

  • 服务号