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Design,Synthesis,and Conformational Dynamics of a Gated Molecular Basket

机译:门控分子篮的设计,合成和构象动力学

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摘要

We have developed a synthesis and examined the conformational behavior and recognition properties of dynamic molecular containers 1-3.As follows from the ~1H NMR dilution,diffusion NMR,and vapor pressure osmometry measurements,compound 1 has a low affinity for intermolecular aggregation and is mostly present in monomeric form in dilute chloroform solutions.Inspecting the O-H chemical shift resonances of 1,3,and model compound 4 as a function of temperature afforded the DELTA delta/DELTA T coefficients of 17.0,17.3,and 4.7 ppb K~(-1),respectively.In combination with the results from variable temperature ~1H NMR and IR measurements,the existence of conformers of 1 and 3 in equilibrium,each having a different extent of hydrogen bonding,was confirmed.Molecular mechanics calculations suggested 1_a as the most favorable conformation,with three additional conformers,1_b,1_c,and 1_d,populating local energy minima.Further optimization of each of the four conformers using semiempirical PM3 and ab initio (HF/6-31G*)methods allowed a determination of their relative free energies and the corresponding Boltzmann population distributions which were heavily weighted toward 1_a.A computed composite IR spectrum of a fraction-weighted mixture of the conformers of 1 reproduced the experimentally observed IR spectrum in its structural features,leading to a conclusion that conformer 1_a indeed dominates the equilibrium.The egg-shaped cavity of 1 (136.6 A~3)is complementary in size,shape,and electrostatic potential to chloroform (74.9 A~3).A single-crystal X-ray study of 2 revealed a disordered chloroform molecule positioned inside the cavitand along its C_3 axis.
机译:我们已经开发了合成方法,并研究了动态分子容器1-3的构象行为和识别特性。从〜1H NMR稀释,扩散NMR和蒸气压渗透压法测量得出,化合物1对分子间聚集的亲和力低,并且观察到1,3和模型化合物4的OH化学位移共振随温度的变化得出DELTAΔ/ DELTA T系数分别为17.0、17.3和4.7 ppb K〜(- 1)。分别结合〜1H NMR和IR的可变温度测量结果,证实了1和3的构象异构体处于平衡状态,每个构象均具有不同的氢键结合力。分子力学计算表明1_a为最有利的构象,具有三个附加构象子1_b,1_c和1_d,填充局部能量最小值。使用半经验PM3和a进一步优化四个构象子中的每一个b的从头算(HF / 6-31G *)方法可以确定其相对自由能和相应的Boltzmann总体分布,这些分布的权重严重接近1_a.1的构象异构体的分数加权混合物的计算复合红外光谱图实验观察到的红外光谱的结构特征得出结论,构象异构体1_a确实主导了平衡。1的蛋形腔(136.6 A〜3)在尺寸,形状和静电势上与氯仿(74.9 A〜 3)。对2的单晶X射线研究表明,无定型氯仿分子沿其C_3轴位于腔体内部。

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  • 来源
    《Journal of the American Chemical Society》 |2006年第17期|p.5887-5894|共8页
  • 作者单位

    Contribution from the Department of Chemistry,The Ohio State University,100 West 18th Avenue,Columbus,Ohio 43210;

    Contribution from the Department of Chemistry,The Ohio State University,100 West 18th Avenue,Columbus,Ohio 43210;

    Contribution from the Department of Chemistry,The Ohio State University,100 West 18th Avenue,Columbus,Ohio 43210;

    Contribution from the Department of Chemistry,The Ohio State University,100 West 18th Avenue,Columbus,Ohio 43210;

    Contribution from the Department of Chemistry,The Ohio State University,100 West 18th Avenue,Columbus,Ohio 43210;

  • 收录信息 美国《科学引文索引》(SCI);美国《工程索引》(EI);美国《生物学医学文摘》(MEDLINE);美国《化学文摘》(CA);
  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类 化学;
  • 关键词

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