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Mutagenesis of an Active-Site Loop in Tryptophan Hydroxylase Dramatically Slows the Formation of an Early Intermediate in Catalysis

机译:色氨酸羟化酶中活性位点环的诱变极大地减慢了催化中早期中间体的形成。

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摘要

Solution studies of the aromatic amino acid hydroxylases are consistent with the Fe~(IV)O intermediate not forming until both the amino acid and tetrahydropterin substrates have bound. Structural studies have shown that the positions of active-site loops differs significantly between the free enzyme and the enzyme-amino acid-tetrahydropterin complex. In tryptophan hydroxylase (TrpH) these mobile loops contain residues 124–134 and 365–371, with a key interaction involving Ile366. The I366N mutation in TrpH results in decreases of 1–2 orders of magnitude in the k _(cat) and k _(cat)/K _(m) values. Single turnover analyses establish that the limiting rate constant for turnover is product release for the wild-type enzyme but is formation of the first detectable intermediate I in catalysis in the mutant enzyme. The mutation does not alter the kinetics of NO binding to the ternary complex nor does it uncouple Fe~(IV)O formation from amino acid hydroxylation. The effects on the k _(cat) value of wild-type TrpH of changing viscosity are consistent with rate-limiting product release. While the effect of viscosity on the k _(cat)/K _(O_(2)) value is small, consistent with reversible oxygen binding, the effects on the k _(cat)/K _(m) values for tryptophan and the tetrahydropterin are large, with the latter value exceeding the expected limit and varying with the identity of the viscogen. In contrast, the kinetic parameters of I366N TrpH show small changes with viscosity. The results are consistent with binding of the amino acid and pterin substrate to form the ternary complex being directly coupled to closure of loops over the active site and formation of the reactive complex. The mutation destabilizes this initial event.
机译:芳香族氨基酸羟化酶的溶液研究与Fe〜(IV)O中间体直到氨基酸和四氢蝶呤底物都结合后才形成一致。结构研究表明,游离酶和酶-氨基酸-四氢蝶呤复合物之间的活性位点环的位置明显不同。在色氨酸羟化酶(TrpH)中,这些移动环包含残基124–134和365–371,其关键相互作用涉及Ile366。 TrpH中的I366N突变导致 k _(cat)和 k _(cat)/ K _(m)值降低1-2个数量级。单次营业额分析确定营业额的限制速率常数是野生型酶的产物释放,但是突变酶催化中第一个可检测的中间体I的形成。突变不会改变NO与三元复合物的结合动力学,也不会使Fe〜(IV)O的形成与氨基酸羟基化脱钩。改变粘度对野生型TrpH的k_(cat)值的影响与限速产物释放一致。尽管粘度对 k _(cat)/ K _(O_(2))值的影响很小,但与可逆的氧键合一致,但对 k _(cat)/色氨酸和四氢蝶呤的K _(m)值很大,后者的值超过了预期的极限,并随粘性原的不同而变化。相反,I366N TrpH的动力学参数随粘度变化很小。结果与氨基酸和蝶呤底物的结合以形成三元复合物相一致,所述三元复合物直接偶联至活性位点上的环的闭合并形成反应性复合物。突变使该初始事件不稳定。

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  • 来源
    《Journal of the American Chemical Society》 |2018年第15期|5185-5192|共8页
  • 作者单位

    Department of Biochemistry and Structural Biology, University of Texas Health Science Center at San Antonio, San Antonio, Texas 78229, United States;

    Department of Biochemistry and Structural Biology, University of Texas Health Science Center at San Antonio, San Antonio, Texas 78229, United States;

  • 收录信息 美国《科学引文索引》(SCI);美国《工程索引》(EI);美国《生物学医学文摘》(MEDLINE);美国《化学文摘》(CA);
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