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Direct Detection and Identification of Arcobacter Species by Multiplex PCR in Chicken and Wastewater Samples from Spain

机译:多重PCR直接检测和鉴定西班牙鸡肉和废水样品中的无杆杆菌

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Twenty-two chicken livers, 10 chicken carcasses, and 15 wastewater samples were processed and analyzed for Arcobacter by PCR and traditional culture methods. Samples were enriched for 24 and 48 h, incubated at 30℃ under aerobic conditions, and streaked on blood selective media. To determine the best isolation conditions, 20 samples also were processed under microaerophilic conditions at 37℃. Simple and multiplex PCR assays were used directly with enrichment broths and isolated strains. Seventeen Arcobacter strains were isolated from chicken samples, and A. butzleri was the only Arcobacter species identified. The direct PCR assay revealed that 29 of the 32 chicken samples were contaminated with Arcobacter. A. butzleri was the most frequently detected species, although Arcobacter cryaerophilus also was present in some of the samples and Arcobacter skirrowii occasionally was detected. All the wastewater samples were positive by PCR assay for Arcobacter after 24 h of enrichment. A. butzleri and A. cryaerophilus were detected with the multiplex PCR assay. Fourteen Arcobacter strains were isolated from 10 of the 15 water samples analyzed; 7 were identified as A. butzleri and the remaining 7 were A. cryaerophilus. Both for chicken and water samples, Arcobacter detection rate for PCR amplification was higher than for culture isolation. These results indicate the high prevalence of Arcobacter in chicken and wastewater and the inadequacy of available cultural methods for its detection. The species-specific multiplex PCR assay is a rapid method for assessing Arcobacter contamination in chicken and wastewater samples and is a viable alternative to biochemical identification of isolated strains.
机译:通过PCR和传统培养方法,对22个鸡肝,10个鸡尸体和15个废水样品进行了处理,并分析了弓形虫的细菌。将样品富集24和48 h,在有氧条件下于30℃孵育,并在血液选择培养基上划线。为了确定最佳分离条件,我们还在37℃的微需氧条件下处理了20个样品。简单和多重PCR分析直接与富集肉汤和分离的菌株一起使用。从鸡样品中分离出十七株芽孢杆菌,而A. butzleri是唯一鉴定出的芽孢杆菌属。直接PCR分析显示32个鸡样品中有29个被Arcobacter污染。尽管某些样品中也存在嗜冷杆菌,但偶尔检测到skirrowii杆菌。富集24 h后,通过PCR检测所有的废水样品均为无杆杆菌阳性。用多重PCR测定法检测了丁酸曲霉和嗜酸曲霉。从所分析的15个水样中的10个分离出14株杆菌。 7例被确认为布氏曲霉,其余7例为嗜冷曲霉。无论是鸡肉还是水样,PCR扩增检测的Arcobacter检出率均高于培养物分离。这些结果表明,在鸡和废水中高分枝杆菌的流行以及用于其检测的可用培养方法的不足。特定于物种的多重PCR分析是一种评估鸡肉和废水样品中芽孢杆菌污染的快速方法,是分离菌株的生化鉴定的可行替代方法。

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