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首页> 外文期刊>Journal of Clinical Microbiology >Detection of Campylobacter Species and Arcobacter butzleri in Stool Samples by Use of Real-Time Multiplex PCR
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Detection of Campylobacter Species and Arcobacter butzleri in Stool Samples by Use of Real-Time Multiplex PCR

机译:实时多重PCR检测粪便样品中的弯曲杆菌属和弓形虫

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The presence of Campylobacter (or Campylobacter-like) species in stools from patients suspected of infectious gastroenteritis (n = 493) was investigated using real-time PCR for detection of Arcobacter butzleri (hsp60 gene), Campylobacter coli (ceuE gene), Campylobacter jejuni (mapA), five acknowledged pathogenic Campylobacter spp. (C16S_Lund assay), and the Campylobacter genus (C16S_LvI assay). In total, 71.4% of the samples were positive for Campylobacter DNA (n = 352) by a Campylobacter genus-specific (C16S_LvI) assay. A total of 23 samples (4.7%) were positive in the C16S_Lund assay, used for detection of C. jejuni, C. coli, C. lari, C. upsaliensis, and C. hyointestinalis. Subsequent identification of these samples yielded detection frequencies (DF) of 4.1% (C. jejuni), 0.4% (C. coli), and 0.4% (C. upsaliensis). The DF of A. butzleri was 0.4%. Interestingly, sequencing of a subgroup (n = 46) of C16S_LvI PCR-positive samples resulted in a considerable number of Campylobacter concisus-positive samples (n = 20). PCR-positive findings with the C16S_Lund and C. jejuni/C. coli-specific assays were associated with more serious clinical symptoms (diarrhea and blood). Threshold cycle (CT) values of C. jejuni/C. coli PCR-positive samples were comparable to those of the C16S_Lund PCR (P = 0.21). CT values for both assays were significantly lower than those of the C16S_LvI assay (P < 0.001 and P < 0.00001, respectively). In conclusion, this study demonstrated that in combination, the C. jejuni/C coli-specific assays and the C16S_Lund assay are both useful for routine screening purposes. Furthermore, the DF of the emerging pathogen C. concisus was at least similar to the DF of C. jejuni.
机译:使用实时荧光定量PCR检测疑似感染性肠胃炎( n = 493)的患者粪便中存在弯曲菌(或弯曲杆菌样)物种,以检测布氏弧菌( hsp60 基因),大肠弯曲菌( ceuE 基因),空肠弯曲菌( mapA ),五种公认的致病性弯曲杆菌。 (C16S_Lund检测)和弯曲杆菌属(C16S_LvI检测)。通过弯曲杆菌属特异性(C16S_LvI)分析,总共有71.4%的样品呈弯曲杆菌DNA阳性( n = 352)。在C16S_Lund分析中,总共有23个样品(4.7%)为阳性,用于检测空肠弯曲杆菌,大肠弯曲杆菌,拉里弯曲杆菌,upsaliensis和肺肠弯曲杆菌。随后对这些样品的鉴定产生了4.1%(空肠弯曲杆菌),0.4%(大肠杆菌)和0.4%(upsaliensis)的检测频率(DF)。 but曲霉的DF为0.4%。有趣的是,对C16S_LvI PCR阳性样品的一个亚组( n = 46)进行测序后,产生了大量弯曲杆菌弯曲合子阳性样品( n = 20)。 C16S_Lund和空肠弯曲杆菌/ C的PCR阳性结果。大肠杆菌特异性测定与更严重的临床症状(腹泻和血液)相关。空肠弯曲杆菌/ C。的阈值周期( C T )值。大肠杆菌PCR阳性样本与C16S_Lund PCR样本相当( P = 0.21)。两种测定的 C T 值均显着低于C16S_LvI测定的值( P <0.001和 P <分别为0.00001)。总之,这项研究表明,空肠弯曲杆菌/大肠杆菌特异检测法和C16S_Lund检测法结合起来可用于常规筛查。此外,新出现的病原体弓形虫的DF至少类似于空肠弯曲杆菌的DF。

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