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首页> 外文期刊>JMIR Medical Informatics >Enabling External Inquiries to an Existing Patient Registry by Using the Open Source Registry System for Rare Diseases: Demonstration of the System Using the European Society for Immunodeficiencies Registry
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Enabling External Inquiries to an Existing Patient Registry by Using the Open Source Registry System for Rare Diseases: Demonstration of the System Using the European Society for Immunodeficiencies Registry

机译:通过使用罕见疾病的开源注册系统来实现对现有患者注册表的外部查询:使用欧洲免疫定义注册管理机构的系统示范

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Background The German Network on Primary Immunodeficiency Diseases (PID-NET) utilizes the European Society for Immunodeficiencies (ESID) registry as a platform for collecting data. In the context of PID-NET data, we show how registries based on custom software can be made interoperable for better collaborative access to precollected data. The Open Source Registry System for Rare Diseases ( Open-Source-Registersystem für Seltene Erkrankungen [OSSE], in German) provides patient organizations, physicians, scientists, and other parties with open source software for the creation of patient registries. In addition, the necessary interoperability between different registries based on the OSSE, as well as existing registries, is supported, which allows those registries to be confederated at both the national and international levels. Objective Data from the PID-NET registry should be made available in an interoperable manner without losing data sovereignty by extending the existing custom software of the registry using the OSSE registry framework. Methods This paper describes the following: (1) the installation and configuration of the OSSE bridgehead, (2) an approach using a free toolchain to set up the required interfaces to connect a registry with the OSSE bridgehead, and (3) the decentralized search, which allows the formulation of inquiries that are sent to a selected set of registries of interest. Results PID-NET uses the established and highly customized ESID registry software. By setting up a so-called OSSE bridgehead, PID-NET data are made interoperable according to a federated approach, and centrally formulated inquiries for data can be received. As the first registry to use the OSSE bridgehead, the authors introduce an approach using a free toolchain to efficiently implement and maintain the required interfaces. Finally, to test and demonstrate the system, two inquiries are realized using the graphical query builder. By establishing and interconnecting an OSSE bridgehead with the underlying ESID registry, confederated queries for data can be received and, if desired, the inquirer can be contacted to further discuss any requirements for cooperation. Conclusions The OSSE offers an infrastructure that provides the possibility of more collaborative and transparent research. The decentralized search functionality includes registries into one search application while still maintaining data sovereignty. The OSSE bridgehead enables any registry software to be integrated into the OSSE network. The proposed toolchain to set up the required interfaces consists of freely available software components that are well documented. The use of the decentralized search is uncomplicated to use and offers a well-structured, yet still improvable, graphical user interface to formulate queries.
机译:背景技术德国对原发性免疫缺陷疾病(PID-Net)的网络利用欧洲免疫缺陷(ESID)登记处作为收集数据的平台。在PID-Net数据的上下文中,我们展示了基于自定义软件的注册级别可以互操作,以便更好地协作对前导数据进行协作。用于稀有疾病的开源注册系统(开源 - 源 - 注册系统FürSelteneErkrankungen[OSSE],德语)为患者组织,医生,科学家和其他派对提供开源软件,用于创建患者注册表。此外,支持基于OSSE的不同注册管理机构以及现有注册机构的必要互操作性,并允许这些注册管理机构在国家和国际一级联合。来自PID-Net注册表的客观数据应以可互操作的方式提供,而不会使用OSSE注册表框架扩展了注册表的现有自定义软件,以便可互操作的方式可用,而不会丢失数据主权。方法本文介绍以下内容:(1)OSSE BridgeHead的安装和配置,(2)使用自由工具链设置所需接口以将注册表与OSSE BridgeHead连接的方法,以及(3)分散搜索,这允许制定被发送给所选择的利息注册定的查询。结果PID-Net使用已建立和高度定制的ESID注册表软件。通过设置所谓的OSSE BridgeHead,PID-Net数据根据联合方法进行可互操作,并且可以接收集中的数据查询。作为第一个使用OSSE BridgeHead的注册表,作者使用自由工具链介绍了一种方法,以有效地实现和维护所需的接口。最后,要测试和演示系统,使用图形查询生成器实现了两个查询。通过与底层ESID注册表建立和互连OSSE BridgeHead,可以接收对数据的联合查询,如果需要,可以联系查询以进一步讨论任何合作要求。结论OSSE提供了一种基础设施,可提供更加协作和透明的研究。分散的搜索功能包括注册表,同时仍然保持数据主权。 OSSE BridgeHead使任何注册软件都能够集成到OSSE网络中。建议的工具链设置所需的接口包括可自由的可用软件组件组成。使用分散搜索的使用并不简单地使用,并提供结构良好的,但仍然可更新的图形用户界面以制定查询。

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