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首页> 外文期刊>Frontiers in Bioengineering and Biotechnology >Predicting the Risk of Melanoma Metastasis Using an Immune Risk Score in the Melanoma Cohort
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Predicting the Risk of Melanoma Metastasis Using an Immune Risk Score in the Melanoma Cohort

机译:在黑色素瘤队列中使用免疫风险评分预测黑色素瘤转移的风险

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Melanoma is a highly aggressive cancer, attracting increasing attention worldwide. The 5-year survival rate of patients with metastatic melanoma is low. Therefore, it is critical to identify potential effective biomarkers for diagnosis of melanoma metastasis. In the present study, the melanoma cohort and immune genes were obtained from the Cancer Genome Atlas (TCGA) database and the ImmPort database, respectively. Then we constructed the immune risk score (IRS) using univariate and multivariate logistic analysis. The area under curve (AUC) of IRS in sequencing samples and the initial diagnosis patients were 0.90 and 0.80, respectively. Besides, IRS could add benefits for metastasis diagnosis. For sequencing samples, IRS (OR =16.35, 95% CI=8.74-30.59) increased the odds for melanoma metastasis. Similar results were obtained in the initial diagnosis patients (OR=8.93, 95% CI 3.53-22.61). A composite nomogram was built based on IRS and clinical information with well-fitted calibration curves. We further used other independent melanoma cohorts from Gene Expression Omnibus (GEO) databases to confirm the reliability and validity of the IRS (AUC 0.75, OR 1.04, and P value 0.01 in all cohorts). In conclusion, IRS is significantly associated with melanoma metastasis and can be a novel effective signature for predicting the metastasis risk.
机译:黑色素瘤是一种高度侵略性的癌症,在全球范围内吸引了越来越多的关注。转移性黑素瘤患者的5年生存率低。因此,识别潜在的有效生物标志物以诊断黑素瘤转移至关重要。在本研究中,分别从癌症基因组Atlas(TCGA)数据库和Immport数据库中获得黑色素瘤群和免疫基因。然后我们使用单变量和多变量物流分析构建免疫风险评分(IRS)。在测序样品中的IRS曲线(AUC)下的区域分别为0.90和0.80。此外,IRS可以增加转移诊断的益处。对于测序样品,IRS(或= 16.35,95%CI = 8.74-30.59)增加了黑色素瘤转移的几率。在初始诊断患者(或= 8.93,95%CI 3.53-22.61)中获得了类似的结果。基于IRS和临床信息,建立了一种复合载体,校准曲线。我们进一步使用来自基因表达综合征(Geo)数据库的其他独立黑素瘤群体,以确认IRS(AUC> 0.75,或> 1.04)的可靠性和有效性,并且在所有队列中的P值<0.01)。总之,IRS与黑素瘤转移显着相关,可以是用于预测转移风险的新型有效签名。

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