首页> 外文期刊>Journal of Genomics >Draft Genome Sequence of Providencia sneebia Strain ST1, a Quorum Sensing Bacterium Associated with Marine Microalgae
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Draft Genome Sequence of Providencia sneebia Strain ST1, a Quorum Sensing Bacterium Associated with Marine Microalgae

机译:普罗维登斯氏菌ST1菌株(与海洋微藻有关的群体感应细菌)的基因组序列草案。

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Providencia sneebia strain ST1 is a symbiotic bacterium (belonging to phylum gammaproteobacteria) with marine microalgae. This bacterium exhibits the ability to produce N-Acyl homoserine lactone signal molecule. To date, no genome that originates from marine Providencia spp. has been reported. In this study, we present the genome sequence of this strain. It has a genome size of 4.89 M, with 19 contigs and an average G+C of 51.97%. The function of 4,631 proteins was predicted, and 3,652 proteins were assigned to COG functional categories. Among them, 407 genes are involved in carbohydrate metabolism, 306 genes participate in nitrogen utilization and energy conversion, and 185 genes related to signal transduction process. Thus, this strain plays an active role in the biogeochemical cycle in algal life history. The whole-genome of this isolate and annotation will help enhance understanding of bacterial ecological behavior in the phycosphere
机译:Providencia sneebia菌株ST1是具有海洋微藻的共生细菌(属于γ-变形杆菌门)。该细菌表现出产生N-酰基高丝氨酸内酯信号分子的能力。迄今为止,尚无源自海洋Providencia spp的基因组。已经被报告了。在这项研究中,我们介绍了该菌株的基因组序列。它的基因组大小为4.89 M,具有19个重叠群,平均G + C为51.97%。预测了4,631个蛋白质的功能,并将3,652个蛋白质分配到COG功能类别。其中有407个基因参与了碳水化合物的代谢,有306个基因参与了氮的利用和能量转换,有185个与信号转导过程有关的基因。因此,该菌株在藻类生活史的生物地球化学循环中起着积极的作用。这种分离和注释的全基因组将有助于增进对藻圈细菌生态行为的了解

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