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Surrogate models based on machine learning methods for parameter estimation of left ventricular myocardium

机译:基于机器学习方法的替代模型用于左心室心肌参数估计

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摘要

A long-standing problem at the frontier of biomechanical studies is to develop fast methods capable of estimating material properties from clinical data. In this paper, we have studied three surrogate models based on machine learning (ML) methods for fast parameter estimation of left ventricular (LV) myocardium. We use three ML methods named K-nearest neighbour (KNN), XGBoost and multi-layer perceptron (MLP) to emulate the relationships between pressure and volume strains during the diastolic filling. Firstly, to train the surrogate models, a forward finite-element simulator of LV diastolic filling is used. Then the training data are projected in a low-dimensional parametrized space. Next, three ML models are trained to learn the relationships of pressure–volume and pressure–strain. Finally, an inverse parameter estimation problem is formulated by using those trained surrogate models. Our results show that the three ML models can learn the relationships of pressure–volume and pressure–strain very well, and the parameter inference using the surrogate models can be carried out in minutes. Estimated parameters from both the XGBoost and MLP models have much less uncertainties compared with the KNN model. Our results further suggest that the XGBoost model is better for predicting the LV diastolic dynamics and estimating passive parameters than other two surrogate models. Further studies are warranted to investigate how XGBoost can be used for emulating cardiac pump function in a multi-physics and multi-scale framework.
机译:生物力学研究前沿的长期问题是开发能够从临床数据估算材料特性的快速方法。在本文中,我们研究了基于机器学习(ML)方法的三种代理模型,用于快速参数估计左心室(LV)心肌。我们使用三毫升命名为k最近邻(knn)的方法,Xgboost和多层的Perceptron(MLP)来模拟舒张填充过程中压力和体积菌株之间的关系。首先,为了培训代理模型,使用了一种直接的LV舒张填充的有限元模拟器。然后将训练数据投影在低维参数化空间中。接下来,培训三个ML模型以学习压力体积和压力应变的关系。最后,通过使用那些训练的代理模型来制定逆参数估计问题。我们的结果表明,三毫升型号可以很好地学习压力体积和压力 - 应变的关系,并且使用替代模型的参数推断可以在几分钟内进行。与KNN模型相比,来自XGBoost和MLP模型的估计参数具有远使不确定性远得多。我们的结果进一步表明,XGBoost模型更好地预测LV舒张动力学和估算被动参数,而不是其他两个代理模型。有必要进一步研究来调查XGBoost如何用于在多物理和多尺度框架中模拟心脏泵功能。

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