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Impact of the topology of metapopulations on the resurgence of epidemics rendered by a new multiscale hybrid modeling approach

机译:新型多尺度混合建模方法对种群分布拓扑结构对流行病复发的影响

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摘要

Simulating epidemics in metapopulations is a challenging issue due to the large demographic and geographic scales to incorporate. Traditional epidemiologic models choose to simplify reality by ignoring both the spatial distribution of populations and possible intrapopulation heterogeneities, whereas more recent solutions based on Individual-Based Modeling (IBM) can achieve high precision but are costly to compute and analyze. We introduce here an original alternative to these two approaches, which relies on a novel hybrid modeling framework and incarnates a multiscale view of epidemics. The model relies on a technical fusion of two modeling paradigms: System Dynamics (SD) and Individual-Based Modeling. It features an aggregated representation of local outbreaks rendered in SD, and at the same time a spatially-explicit simulation of the spread between populations simulated in IBM. We first present the design of this deterministic model, show that it can reproduce the dynamics of real resurgent epidemics, and infer from the sensitivity of several spatial factors absent in compartmental models the importance of having large-scale epidemiological processes represented inside of an explicitly disaggregated metapopulation. After discussing the implications of results obtained from simulation runs and the applicability of this model, we conclude that SD–IB hybrid modeling can be an interesting choice to represent epidemics in a spatially-explicit way without necessarily taking into account individual heterogeneities, and therefore it can be considered as a valuable alternative to simple compartmental models suffering from detrimental effects of the well-mixed assumption.
机译:由于要纳入庞大的人口和地理规模,因此模拟在种群中的流行病是一个具有挑战性的问题。传统的流行病学模型选择通过忽略种群的空间分布和可能的种群内异质性来简化现实,而基于个人模型(IBM)的最新解决方案可以实现高精度,但计算和分析成本很高。我们在这里介绍这两种方法的原始替代方法,这些方法依赖于新颖的混合建模框架并体现了流行病的多尺度观点。该模型依赖于两种建模范例的技术融合:系统动力学(SD)和基于个人的建模。它具有以SD呈现的局部暴发的汇总表示,并且同时具有IBM模拟的种群之间分布的空间显式模拟。我们首先介绍这种确定性模型的设计,表明它可以重现真实的复发流行病的动态,并从隔间模型中缺少的几个空间因素的敏感性推断出,在明确分类的内部代表大规模流行病学过程的重要性迁移。在讨论了从模拟运行中获得的结果的含义以及该模型的适用性之后,我们得出结论,SD-IB混合模型可以是一种有趣的选择,以空间明晰的方式表示流行病,而不必考虑各个异质性,因此,它可以被认为是遭受复杂混合假设的有害影响的简单隔室模型的有价值的替代方案。

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