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MRI-based pseudo CT synthesis using anatomical signature and alternating random forest with iterative refinement model

机译:基于MRI的解剖特征和交替随机森林与迭代细化模型的基于MRI的伪CT合成

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摘要

We develop a learning-based method to generate patient-specific pseudo computed tomography (CT) from routinely acquired magnetic resonance imaging (MRI) for potential MRI-based radiotherapy treatment planning. The proposed pseudo CT (PCT) synthesis method consists of a training stage and a synthesizing stage. During the training stage, patch-based features are extracted from MRIs. Using a feature selection, the most informative features are identified as an anatomical signature to train a sequence of alternating random forests based on an iterative refinement model. During the synthesizing stage, we feed the anatomical signatures extracted from an MRI into the sequence of well-trained forests for a PCT synthesis. Our PCT was compared with original CT (ground truth) to quantitatively assess the synthesis accuracy. The mean absolute error, peak signal-to-noise ratio, and normalized cross-correlation indices were , , and for 14 patients’ brain data and , , and for 12 patients’ pelvic data, respectively. We have investigated a learning-based approach to synthesize CTs from routine MRIs and demonstrated its feasibility and reliability. The proposed PCT synthesis technique can be a useful tool for MRI-based radiation treatment planning.
机译:我们开发了一种基于学习的方法,可以从常规获取的磁共振成像(MRI)生成患者特定的伪计算机断层扫描(CT),以进行潜在的基于MRI的放射治疗计划。拟议的伪CT(PCT)合成方法包括训练阶段和合成阶段。在训练阶段,从MRI中提取基于补丁的特征。使用特征选择,将最有信息的特征识别为解剖特征,以基于迭代细化模型训练一系列交替的随机森林。在合成阶段,我们将从MRI中提取的解剖特征输入到训练有素的森林序列中以进行PCT合成。将我们的PCT与原始CT(基本情况)进行比较,以定量评估合成准确性。平均绝对误差,峰值信噪比和归一化互相关指数分别为14个患者的大脑数据和,和12个患者的骨盆数据的。我们研究了一种基于学习的方法来从常规MRI合成CT,并证明了其可行性和可靠性。提出的PCT合成技术可以成为基于MRI的放射治疗计划的有用工具。

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