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Speckle reduction process based on digital filtering and wavelet compounding in optical coherence tomography for dermatology

机译:光学相干断层扫描中基于数字滤波和小波复合的斑点减少过程

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摘要

Optical Coherence Tomography (OCT) has shown a great potential as a complementary imaging tool in the diagnosis of skin diseases. Speckle noise is the most prominent artifact present in OCT images and could limit the interpretation and detection capabilities. In this work we propose a new speckle reduction process and compare it with various denoising filters with high edge-preserving potential, using several sets of dermatological OCT B-scans. To validate the performance we used a custom-designed spectral domain OCT and two different data set groups. The first group consisted in five datasets of a single B-scan captured N times (with N<20), the second were five 3D volumes of 25 B-scans. As quality metrics we used signal to noise (SNR), contrast to noise (CNR) and equivalent number of looks (ENL) ratios. Our results show that a process based on a combination of a 2D enhanced sigma digital filter and a wavelet compounding method achieves die best results in terms of the improvement of the quality metrics. In the first group of individual B-scans we achieved improvements in SNR, CNR and ENL of 16.87 dB, 2.19 and 328 respectively; for the 3D volume datasets the improvements were 15.65 dB, 3.44 and 1148. Our results suggest that the proposed enhancement process may significantly reduce speckle, increasing SNR, CNR and ENL and reducing the number of extra acquisitions of the same frame.
机译:光学相干断层扫描(OCT)在皮肤疾病的诊断中作为互补成像工具已显示出巨大的潜力。斑点噪声是OCT图像中最突出的伪影,可能会限制解释和检测功能。在这项工作中,我们提出了一种新的斑点减少过程,并使用几组皮肤病学OCT B扫描将其与具有高边缘保留潜力的各种降噪滤波器进行比较。为了验证性能,我们使用了定制设计的光谱域OCT和两个不同的数据集组。第一组包含N次捕获(N <20)的一次B扫描的五个数据集,第二组是25个B扫描的五个3D体积。作为质量指标,我们使用了信噪比(SNR),对比噪声(CNR)和等效外观数(ENL)比率。我们的结果表明,基于2D增强sigma数字滤波器和小波复合方法的组合,在改善质量指标方面可以达到最佳效果。在第一组单独的B扫描中,我们将SNR,CNR和ENL分别提高了16.87 dB,2.19和328;对于3D体积数据集,改进为15.65 dB,3.44和1148。我们的结果表明,所提出的增强过程可以显着减少斑点,提高SNR,CNR和ENL,并减少同一帧的额外采集次数。

著录项

  • 来源
  • 会议地点 Munich(DE)
  • 作者单位

    Department of Electronic Engineering, ETSI Telecomunicacion, Universidad Politecnica de Madrid, Spain,Biomedical Research Center in Bioengineering, Biomaterials and Nanomedicine (CIBER-BBN), Spain;

    Biomedical Research Center in Bioengineering, Biomaterials and Nanomedicine (CIBER-BBN), Spain,Department of Electronic Engineering, ETSI Telecomunicacion, Universidad Politecnica de Madrid, Spain;

    Department of Electronic Engineering, ETSI Telecomunicacion, Universidad Politecnica de Madrid, Spain,Biomedical Research Center in Bioengineering, Biomaterials and Nanomedicine (CIBER-BBN), Spain;

    Center for Medical Physics and Biomedical Engineering, Medical University of Vienna, Austria;

    Center for Medical Physics and Biomedical Engineering, Medical University of Vienna, Austria;

    MedLumics S.L Tres Cantos (Madrid), Spain;

    Department of Electronic Engineering, ETSI Telecomunicacion, Universidad Politecnica de Madrid, Spain,Biomedical Research Center in Bioengineering, Biomaterials and Nanomedicine (CIBER-BBN), Spain;

    Center for Medical Physics and Biomedical Engineering, Medical University of Vienna, Austria;

    Department of Electronic Engineering, ETSI Telecomunicacion, Universidad Politecnica de Madrid, Spain,Biomedical Research Center in Bioengineering, Biomaterials and Nanomedicine (CIBER-BBN), Spain;

  • 会议组织
  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类
  • 关键词

    Optical coherence tomography; speckle; digital filtering; denoising; dermatology;

    机译:光学相干断层扫描;斑点;数字滤波去噪皮肤科;

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