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Using Deep Learning to Detect Oesophageal Lesions in PET-CT

机译:利用深度学习检测PET-CT中的食管病变

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PET-CT scans using 18F-FDG are increasingly used to detect cancer, but interpretation can be challengingdue to non-specific uptake and complex anatomical structures nearby. To aide this process, we investigatethe potential of automated detection of lesions in 18F-FDG scans using deep learning tools. A 5-layerconvolutional neural network (CNN) with 2×2 kernels, rectified linear unit (ReLU) activations and two denselayers was trained to detect cancerous lesions in 2D axial image segments from PET scans. Pre-contouredscans from a retrospective cohort study of 486 oesophageal cancer patients were split 80:10:10 into training,validation and test sets. These were then used to generate a total of ~14000 25×25×25 voxel image segments,where tumor present segments were centred on the marked lesion, and tumor absent segments were randomlylocated outside the marked lesion. ROC curves generated from the test dataset produced an average AUC of~99%. Ten-fold cross validation on unseen test data was performed which resulted in a sensitivity of99.5±0.4% and a specificity of 99.4±0.3%. A representative model was used to successfully generatevolumetric tumor probability maps for the test dataset.
机译:使用18F-FDG的PET-CT扫描越来越多地用于检测癌症,但解释可能是具有挑战性的由于在附近的非特异性摄取和复杂的解剖结构。为了助攻这个过程,我们调查使用深度学习工具,18F-FDG扫描中的病变自动检测的潜力。一个5层卷积神经网络(CNN),具有2×2内核,整流线性单元(Relu)激活和两个密集培训层以检测来自PET扫描的2D轴向图像区段中的癌变病变。预削轮从486患者的回顾性队列审查扫描的扫描患者将80:10:10分成训练,验证和测试集。然后用于产生总共〜14000 25×25×25体素图像段,肿瘤当前段以标记的病变为中心,并且肿瘤不存在段随机筛选位于标记的病变之外。从测试数据集生成的ROC曲线产生了平均的AUC〜99%。执行关于看不见的测试数据的十倍交叉验证,导致灵敏度99.5±0.4%,特异性为99.4±0.3%。代表性模型用于成功生成测试数据集的体积肿瘤概率图。

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