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INFERENCE OF GENE REGULATORY NETWORKS USING GENETIC PROGRAMMING AND KALMAN FILTER

机译:基因监管网络推断使用遗传编程和卡尔曼滤波器

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In this paper, gene regulatory networks are inferred through evolutionary modeling and time-series microarray measurements. A nonlinear differential equation model is adopted and an iterative algorithm is proposed to identify the model, where genetic programming is applied to identify the structure of the model and Kalman filtering is employed to estimate the parameters in each iteration. Simulation results using synthetic data and microarray measurements show the effectiveness of the proposed scheme.
机译:在本文中,通过进化建模和时间序列微阵列测量推断基因调节网络。 采用非线性微分方程模型,提出了一种迭代算法来识别模型,其中应用遗传编程来识别模型的结构,并且采用卡尔曼滤波来估计每次迭代中的参数。 使用合成数据和微阵列测量的仿真结果显示了所提出的方案的有效性。

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