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COMPUTING THE QUARTET DISTANCE BETWEEN EVOLUTIONARY TREES OF BOUNDED DEGREE

机译:计算有界度的进化树之间的四倍距离

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We present an algorithm for calculating the quartet distance between two evolutionary trees of bounded degree on a common set of n species. The previous best algorithm has running time O(d~2 n~2) when considering trees, where no node is of more than degree d. The algorithm developed herein has running time O(d~9n log n)) which makes it the first algorithm for computing the quartet distance between non-binary trees which has a sub-quadratic worst case running time.
机译:我们介绍了一种计算常见的N种章节中有界度的两个进化树木之间的四重奏距离的算法。在考虑树木时,先前最好的算法在运行时O(d〜2 n〜2),没有节点超过程度d。这里开发的算法具有运行时间O(D〜9n log n),其使其成为计算非二进制树之间的四重矩距离的第一算法,该算法具有子二次最差案例运行时间。

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