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Quantitative Study Of The Differences In Mithocondrium Distribution Between DENV Infected And Mock Cells

机译:丹佛感染与模拟细胞岩体分布差异的定量研究

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The mithocondria distribution (MD) around nuclei is dynamically changing through clustering, fusion and fission of organelles [1], so the MD takes an appropiated form for each of the different cell functions [2]. Then it is expected that such distribution gets modified when the cell is under viral infection. To study such changes, several videos were taken through a set of live cell imaging experiments on cell cultures expressing fluorescent mithocondria of both: healthy (mock) and infected cells with Dengue Virus (DENV). The fluorescent organelles cluster in regions that shows up to be brighter where the MD is higher, then MD would be extracted from each frame as proportional to the brightness of the picture. Each experiment has follow standard protocols that provide approximately the same initial state for each cell of the same kind (mock or infected). As any studied cell starts from a different pattern of MD around the nuclei, it is expected for each one of those patterns to be equally likely, then the MD density can be approximated as the average of MD in each frame. Each MD has been modeled through a numerical function build as a two dimensional interpolation of the intensity levels, by using a bivariate b-splines method. Each cell has been modeled as an ellipsis, so the MD density function p is a function of the distance to the nuclei center r, the angle from major semi axis θ and time t. By carefully looking at ρ(r,θ,t) at fixed θ or fixed r (figure 1), it is clear that the distribution for infected cells has less defined clusters as shown by having more oscillations and lesser distance between peaks and background. Which means a more disorganized structure. This fact can be used to define a classifier for healthy or infected cells [3]. In this work, a proposal of a quantitative tool to measure the order or disorder on the MD is presented.
机译:核细胞周围的Mithocondria分布(MD)通过聚类,融合和细胞器裂变动态地改变,因此MD针对每个不同的细胞函数采用了一个专为主的形式[2]。然后预计这种分布在细胞处于病毒感染时被修改。为研究此类变化,通过一组目的细胞成像试验进行了几种关于表达两者荧光岩细胞的细胞培养物:健康(模拟)和Dengue病毒(DENV)的感染细胞的细胞培养物。在MD更高的区域中显示出较亮的区域中的荧光细胞器聚集,然后将从每个帧中提取与图像的亮度成比例的每个帧中提取MD。每个实验都遵循标准协议,该协议为同一种类(模拟或感染)的每个单元提供大致相同的初始状态。由于任何研究的小区从核周围的MD的不同模式开始,所以预期的每个图案是同样可能的,那么MD密度可以近似为每个帧中的MD的平均值。通过使用双变量B样条方法,每个MD通过数值函数构建作为强度级别的二维插值来建模。每个电池已经被建模为省略号,因此MD密度函数P是与核心r的距离的函数,来自主要半轴θ和时间t的角度。通过在固定θ或固定r处小心地看ρ(r,θ,t)(图1),显然感染细胞的分布具有较少的簇,如在峰和背景之间具有更多振荡和较小的距离所示。这意味着一个更加混乱的结构。这一事实可用于定义健康或受感染细胞的分类器[3]。在这项工作中,提出了一种用于测量MD上的订单或病症的定量工具的提议。

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