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Generative adversarial network-based image completion to identify abnormal locations in digital breast tomosynthesis images

机译:基于生成对抗网络的图像完成,以识别数字乳房断层合成图像中的异常位置

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Deep learning has achieved great success in image analysis and decision making in radiology. However, a large amount of annotated imaging data is needed to construct well-performing deep learning models. A particular challenge in the context of breast cancer is the number of available cases that contain cancer, given the very low prevalence of the disease in the screening population. The question arises whether normal cases, which in the context of breast cancer screening are available in abundance, can be used to train a deep learning model that identifies locations that are abnormal. In this study, we propose to achieve this goal through the generative adversarial network (GAN)-based image completion. Our hypothesis is that if a generative network has a difficulty to correctly complete a part of an image at a certain location, then such a location is likely to represent an abnormality. We test this hypothesis using a dataset of 4348 patients with digital breast tomosynthesis (DBT) imaging from our institution. We trained our model on normal only images, to be able to fill in parts of images that were artificially removed. Then, using an independent test set, at different locations in the images, we measured how difficult it was for the network to reconstruct an artificially removed patch of the image. The difficulty was measured by mean squared error (MSE) between the original removed patch and the reconstructed patch. On average, the MSE was 2.11 times higher (with standard deviation equal to 1.01) at the locations containing expert-annotated cancerous lesions than that at the locations outside those abnormal locations. Our generative approach demonstrates a great potential for using this model to aid breast cancer detection.
机译:深度学习在放射学中取得了巨大成功。然而,需要大量的注释成像数据来构建性能良好的深度学习模型。乳腺癌背景下的特殊挑战是鉴于筛查人群中疾病的普及率非常低,含有癌症的可用病例数。问题出现了是否在丰富的乳腺癌筛查中的正常情况,可用于培训识别异常的位置的深度学习模型。在这项研究中,我们建议通过生成的对抗网络(GAN)基于图像完成来实现这一目标。我们的假设是,如果生成网络在某个位置难以正确地完成图像的一部分,那么这种位置可能代表异常。我们使用4348名数字乳房Tomosynthesis(DBT)成像的数据集来测试这一假设。我们在正常图像上培训了我们的模型,能够填补人为地删除的图像部分。然后,在图像中的不同位置使用独立的测试集,我们测量了网络重建了人工去除的图像的何种困难。难以通过原始删除的贴片和重建补丁之间的平均平方误差(MSE)测量。平均而言,在含有专家注释的癌变病变的位置,MSE在含有专家注释的癌变病区的位置(标准偏差等于1.01)比在那些异常位置之外的地点的位置更高。我们的生成方法表明使用该模型帮助乳腺癌检测的巨大潜力。

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