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Deterministic convection-diffusion approach for modeling cell motion and spatial organization: Experimentation on avascular tumor growth

机译:确定性对流扩散方法模拟细胞运动和空间组织:无血管肿瘤生长的实验

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To investigate cell spatial organization in complex biological dynamics, an individual-based model that represents cell motion in a deterministic way is proposed and then experimented on avascular tumor growth case. Cell motion remains a fundamental process in many complex biological dynamics such as morphogenesis or cell aggregation. Mathematical models are often used to represent cellular motility and spatial dynamics. However, the variability and the interactions between individuals, which are crucial to build accurate predictive models, are difficult to represent using differential equations. We propose, in this paper, an individual-based approach that allows describing cell motion at deterministic way with diffusion and convection processes. Such approach is built using Smoothed Particle Hydrodynamics (SPH) method and allows representing spatially each cell and its basic biological primitives. The relevance of this approach is illustrated on avascular tumor growth to study the effects of microenvironment (nutrients) and cell individual motion in tumor development. The results shown that the model can qualitatively predict a number of cellular behaviors that have been observed in experiments.
机译:为了研究复杂生物动力学中的细胞空间组织,提出了一种确定性的代表细胞运动的基于个体的模型,然后在无血管肿瘤生长的情况下进行了实验。细胞运动仍然是许多复杂的生物动力学(例如形态发生或细胞聚集)中的基本过程。数学模型通常用于表示细胞运动性和空间动力学。然而,对于建立精确的预测模型至关重要的个体之间的变异性和相互作用,很难用微分方程来表示。在本文中,我们提出了一种基于个体的方法,该方法可以确定性地描述具有扩散和对流过程的细胞运动。这种方法是使用平滑粒子流体动力学(SPH)方法构建的,并允许在空间上表示每个单元及其基本的生物学原语。说明了该方法与无血管肿瘤生长有关的意义,以研究微环境(营养物)和细胞个体运动在肿瘤发展中的作用。结果表明,该模型可以定性预测实验中观察到的许多细胞行为。

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