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Procedure for the configuration of parallel nucleic acid analysis procedures for sequential mass classification

机译:配置用于顺序质量分类的平行核酸分析程序的程序

摘要

Configuring nucleic acid for analysis of sequence classification, comprising selecting capture nucleic acid complementary to a range of target nucleic acids, is new. ??Configuring nucleic acid methods of analysis for sequence classification, comprises: ??(a) selecting capture nucleic acid complementary if possible to a range of target nucleic acids by the binding energy or binding probability; ??(b) selecting capture nucleic acid complementary if possible to a range of target nucleic acids in bulk serums containing a range of nucleic acids; ??(c) selecting capture nucleic acid complementary if possible to a range of target nucleic acids with consideration of at least one of the following criteria database quality, database sensitivity, database specificity, positive or negative correctness concerning the database, agreement, rate of false negatives or positives concerning the database, database diversity, redundancy level, tolerance level, distance difference, hybridizing initiation place, binding to the capture nucleic acid, relative length compared to the capture nucleic acid, accessibility of the target to the capture nucleic acid, relative length of the capture nucleic acid compared to the target and T-content; or ??(d) selecting capture nucleic acid complementary if possible to a range of target nucleic acids satisfying two or all three of (a) -(c)above whereby also known are one or a combination of the number of hits, fusion temperature, library size, secondary structure of the capture nucleic acid, capture/capture dimer, spacer or GC-binding. ??Independent claims are also included for: ??(i) a computer programme with code for carrying out the method of the invention; ??(ii) a computer programme product with computer code on a machine-readable container; ??(iii) a device which holds the computer programme; ??(iv) parallel nucleic acid for sequence classification which is configured using the method.
机译:配置核酸以分析序列分类,包括选择与一系列靶核酸互补的捕获核酸,是新的。配置用于序列分类的核酸分析方法,包括:(a)如果可能,通过结合能或结合概率选择与一系列靶核酸互补的捕获核酸; (b)在可能的情况下选择与含有一系列核酸的大量血清中的一系列靶核酸互补的捕获核酸; (c)如果可能,应考虑以下标准数据库质量,数据库敏感性,数据库特异性,与数据库有关的阳性或阴性正确性,协议,有关数据库的假阴性或阳性率,数据库多样性,冗余水平,耐受水平,距离差异,杂交起始位置,与捕获核酸的结合,与捕获核酸相比的相对长度,靶标与捕获核酸的可及性酸,捕获核酸相对于靶标的相对长度和T含量;或(d)如果可能的话,选择与满足上述(a)-(c)中的两个或全部三个的靶核酸范围互补的捕获核酸,其中也已知一个或多个命中数目的组合,融合温度,文库大小,捕获核酸的二级结构,捕获/捕获二聚体,间隔子或GC结合。独立权利要求还包括:(i)具有用于执行本发明方法的代码的计算机程序; (ii)一种计算机程序产品,在计算机可读容器中具有计算机代码; (iii)装有计算机程序的设备; (iv)使用该方法配置的用于序列分类的平行核酸。

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