Genome analysis program, recording medium recording the program, genome analysis apparatus, and genome analysis method

摘要

PPROBLEM TO BE SOLVED: To streamline the use of computer resources and streamline an overall analysis of base sequences by comparing compression rules of the base sequences. PSOLUTION: An input part 301 receives the input of a sequence to be compared, and a determination part 302 and a compression part 303 compress the input sequence to be compared according to compression rules stored in a compression rule DB 120. A compressed character string of a reference sequence is acquired from a compressed information DB 310. A first extraction part 304 and a second extraction part 305 extract particular character information from the compressed character string of the sequence to be compared and the compressed character string of the reference sequence. A comparison part 306 compares the extracted particular character information. A determination part 307 determines whether there is homology by reference to homology rules of homology in character information representing bases stored in a homology rule DB 130. An output part 308 outputs the comparison result. PCOPYRIGHT: (C)2007,JPO&INPIT