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Systems and methods for determining suitable entities for expanding established causal molecular biological networks and for determining significant causal relationships between entities of established causal molecular biological networks and candidate entities

机译:用于确定用于扩展已建立的因果分子生物学网络的合适实体以及用于确定已建立的因果分子生物学网络的实体与候选实体之间的重要因果关系的系统和方法

摘要

In a first aspect, there is provided a method for determining suitable entities for expanding an established causal molecular biological network, said method comprising: Providing an established causal molecular biological network, a candidate set of entities and abundance data thereof; Generating at least one intermediate expansion of said established causal molecular biological network with a defined part of the candidate set of entities by use of a computer program and by using the abundance data; Determining a measure of interrelationship for every entity of the candidate set of entities with respect to at least some of the entities of the established causal molecular biological network; Selecting entities out of the candidate set of entities based on the determined measure of interrelationship.;According to a second aspect, there is provided a method for determining significant causal relationships between entities of an established causal molecular biological network and candidate entities.;There are also provided a computer program and an apparatus, suitable for implementing the methods.
机译:在第一方面,提供了一种用于确定用于扩展已建立的因果分子生物学网络的合适实体的方法,所述方法包括:提供已建立的因果分子生物学网络,候选实体及其丰度数据;以及通过使用计算机程序并通过使用丰度数据,用候选实体集合的定义部分生成所述已建立的因果分子生物学网络的至少一个中间扩展;确定候选实体集合中的每个实体相对于已建立的因果分子生物学网络中至少某些实体的相互关系的度量;基于所确定的相互关系度量从候选实体集合中选择实体。根据第二方面,提供了一种用于确定已建立的因果分子生物学网络的实体与候选实体之间的重要因果关系的方法。还提供了适合于实现该方法的计算机程序和装置。

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