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Bioinformatics and Biology Insights

【机译】：生物信息学和生物学思考

ISSN：-
出版周期：
语言：English

起始发布年份：2007
出版者：Auckland, New Zealand : Libertas Academica
出版地：United States

NLM刊名缩写：Bioinform Biol Insights

数据库引入：PubMed: v1, 2007-, PMC

MeSH词表主题词：Computational Biology*

备注：Description based on first issue; title from journal home page (publisher's Web展开▼

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1.Different Functional Gene Clusters in Yeast have Different Spatial Distributions of the Transcription Factor Binding Sites

机译：酵母中不同的功能基因簇具有不同的转录因子结合位点空间分布
- 作者：Wei-Sheng Wu
- 期刊名称：《Bioinformatics and Biology Insights》 | 2011年第-1期
- yeast promoter TFBS spatial distribution;
2.Conceptual Aspects of Large Meta-Analyses with Publicly Available Microarray Data: A Case Study in Oncology

机译：大型荟萃分析的概念方面可公开获得的微阵列数据：肿瘤学案例研究
- 作者：Markus Schmidberger;Sabine Lennert;Ulrich Mansmann
- 期刊名称：《Bioinformatics and Biology Insights》 | 2011年第-1期
- meta-analysis oncology r public microarray data gene graphs;
3.Identification of Drought-Responsive Universal Stress Proteins in Viridiplantae

机译：茄科植物中干旱响应型通用胁迫蛋白的鉴定
- 作者：Raphael D. Isokpehi;Shaneka S. Simmons;Hari H.P. Cohly;Stephen I.N. Ekunwe;Gregorio B. Begonia;Wellington K. Ayensu
- 期刊名称：《Bioinformatics and Biology Insights》 | 2011年第-1期
- drought expressed sequence tags microsatellite plants Pfam salinity simple sequence repeats Uniprot universal stress protein domain viridiplantae;
4.Amino Acid Features of P1B-ATPase Heavy Metal Transporters Enabling Small Numbers of Organisms to Cope with Heavy Metal Pollution

机译：P1B-ATPase重金属转运蛋白的氨基酸特征使少量生物能够应对重金属污染
- 作者：E. Ashrafi;A. Alemzadeh;M. Ebrahimi;E. Ebrahimie;N. Dadkhodaei;M. Ebrahimi
- 期刊名称：《Bioinformatics and Biology Insights》 | 2011年第-1期
- environment heavy metals transporter ATPase pumps modeling bioinformatics;
5.Gene Networks Driving Bovine Mammary Protein Synthesis During the Lactation Cycle

机译：在泌乳周期中驱动牛乳腺蛋白合成的基因网络
- 作者：Massimo Bionaz;Juan J. Loor
- 期刊名称：《Bioinformatics and Biology Insights》 | 2011年第-1期
- protein synthesis bovine mammary mTOR insulin signaling qPCR;
6.Mouse Retinal Development: a Dark Horse Model for Systems Biology Research

机译：小鼠视网膜发育：系统生物学研究的黑马模型
- 作者：Xia Zhang;Jeanne M. Serb;M. Heather West Greenlee
- 期刊名称：《Bioinformatics and Biology Insights》 | 2011年第-1期
- retina cell fate determination network systems biology;
7.Functional Annotation Analytics of Rhodopseudomonas palustris Genomes

机译：红假单胞菌基因组功能注释分析
- 作者：Shaneka S. Simmons;Raphael D. Isokpehi;Shyretha D. Brown;Donee L. McAllister;Charnia C. Hall;Wanaki M. McDuffy;Tamara L. Medley;Udensi K. Udensi;Rajendram V. Rajnarayanan;Wellington K. Ayensu;Hari H.P. Cohly
- 期刊名称：《Bioinformatics and Biology Insights》 | 2011年第-1期
- aquaporins biohydrogen production comparative genomics functional annotation fermentation Pfam domains Rhodopseudomonas palustris strain-specific genes uniquely shared genes visual analytics;
8.Control Design for Signal Transduction Networks

机译：信号转导网络的控制设计
- 作者：Chun-Liang Lin;Yuan-Wei Liu;Chia-Hua Chuang
- 期刊名称：《Bioinformatics and Biology Insights》 | 2009年第-1期
- signal transduction networks biochemical networks systems biology control stability;
9.Bioinformatics as a Tool for Assessing the Quality of Sub-Cellular Proteomic Strategies and Inferring Functions of Proteins: Plant Cell Wall Proteomics as a Test Case

机译：生物信息学作为评估亚细胞蛋白质组学策略质量和推断蛋白质功能的工具：植物细胞壁蛋白质组学作为测试案例
- 作者：Hélène San Clemente;Rafael Pont-Lezica;Elisabeth Jamet
- 期刊名称：《Bioinformatics and Biology Insights》 | 2009年第-1期
- bioinformatics cell wall plant proteomics;
10.Sequence Analysis of the Full-length cDNA and Protein Structure Homology Modeling of FABP2 from Paralichthys Olivaceus

机译：拟南芥FABP2全长cDNA的序列分析和蛋白质结构同源性建模
- 作者：Xiaowu Chen;Zhiyi Shi
- 期刊名称：《Bioinformatics and Biology Insights》 | 2009年第-1期
- paralichthys olivaceus intestinal fatty acid-binding protein in silico cloning;
11.Universal Features for the Classification of Coding and Non-coding DNA Sequences

机译：编码和非编码DNA序列分类的通用功能
- 作者：Nicolas Carels;Ramon Vidal;Diego Frías
- 期刊名称：《Bioinformatics and Biology Insights》 | 2009年第-1期
- genomics exon prediction purine bias coding features open reading frame ancestral codon;
12.Predicting Consensus Structures for RNA Alignments Via Pseudo-Energy Minimization

机译：通过伪能量最小化预测RNA比对的共识结构
- 作者：Junilda Spirollari;Jason T.L. Wang;Kaizhong Zhang;Vivian Bellofatto;Yongkyu Park;Bruce A. Shapiro
- 期刊名称：《Bioinformatics and Biology Insights》 | 2009年第-1期
- RNA secondary structure prediction Drosophila secondary structure Rfam sequence alignments normalized energy;
13.Automated Detection of Conformational Epitopes Using Phage Display Peptide Sequences

机译：使用噬菌体展示肽序列自动检测构象表位
- 作者：Surendra S Negi;Werner Braun
- 期刊名称：《Bioinformatics and Biology Insights》 | 2009年第-1期
- conformational epitopes peptides phage display;
14.affyPara—a Bioconductor Package for Parallelized Preprocessing Algorithms of Affymetrix Microarray Data

机译：affyPara-用于Affymetrix芯片数据的并行预处理算法的生物导体包装
- 作者：Markus Schmidberger;Esmeralda Vicedo;Ulrich Mansmann
- 期刊名称：《Bioinformatics and Biology Insights》 | 2009年第-1期
- parallel computing R microarray preprocessing normalization;
15.Gene Expression Based Leukemia Sub-Classification Using Committee Neural Networks

机译：使用委员会神经网络的基于基因表达的白血病亚分类
- 作者：Mihir S. Sewak;Narender P. Reddy;Zhong-Hui Duan
- 期刊名称：《Bioinformatics and Biology Insights》 | 2009年第-1期
- leukemia cancer neural networks microarray gene selection sample classification;
16.Gromita: A Fully Integrated Graphical User Interface to Gromacs 4

机译：Gromita：Gromacs 4的完全集成的图形用户界面
- 作者：Diamantis Sellis;Dimitrios Vlachakis;Metaxia Vlassi
- 期刊名称：《Bioinformatics and Biology Insights》 | 2009年第-1期
- molecular dynamics simulation graphical user interface gromacs cross-platform;
17.Graphical User Interfaces for Molecular Dynamics—Quo Vadis?

机译：用于分子动力学的图形用户界面-Qu Vadis？
- 作者：B. Knapp;W. Schreiner
- 期刊名称：《Bioinformatics and Biology Insights》 | 2009年第-1期
- molecular dynamics graphical user interface;
18.A Rough Set-Based Model of HIV-1 Reverse Transcriptase Resistome

机译：基于粗糙集的HIV-1逆转录酶抵抗力模型
- 作者：Marcin Kierczak;Krzysztof Ginalski;Michał Dramiński;Jacek Koronacki;Witold Rudnicki;Jan Komorowski
- 期刊名称：《Bioinformatics and Biology Insights》 | 2009年第-1期
- viral proteomics bioinformatics HIV-1 drug-resistance viral complexity resistance model;
19.Inferring Transcriptional Interactions by the Optimal Integration of ChIP-chip and Knock-out Data

机译：通过ChIP芯片和敲除数据的最佳整合来推断转录相互作用
- 作者：Haoyu Cheng;Lihua Jiang;Maoying Wu;Qi Liu
- 期刊名称：《Bioinformatics and Biology Insights》 | 2009年第-1期
- regulatory interaction transcription factor ChIP knock-out data P-value threshold hypergeometric distribution cooperativity;
20.Classifying Coding DNA with Nucleotide Statistics

机译：用核苷酸统计数据对编码DNA进行分类
- 作者：Nicolas Carels;Diego Frías
- 期刊名称：《Bioinformatics and Biology Insights》 | 2009年第-1期
- genomics universal correlation purines bias coding features open reading frame ancestral codon;
21.Using the Multiple Analysis Approach to Reconstruct Phylogenetic Relationships among Planktonic Foraminifera from Highly Divergent and Length-polymorphic SSU rDNA Sequences

机译：使用多重分析方法从高度不同和长度多态的SSU rDNA序列重建浮游有孔虫之间的亲缘关系
- 作者：Ralf Aurahs;Markus Göker;Guido W. Grimm;Vera Hemleben;Christoph Hemleben;Ralf Schiebel;Michal Kučera
- 期刊名称：《Bioinformatics and Biology Insights》 | 2009年第-1期
- planktonic foraminifera phylogeny fossil record automated alignment;
22.An Efficient Method to Identify Conditionally Activated Transcription Factors and their Corresponding Signal Transduction Pathway Segments

机译：识别条件激活转录因子及其信号转导通路节段的有效方法
- 作者：Haiyan Hu
- 期刊名称：《Bioinformatics and Biology Insights》 | 2009年第-1期
- signal transduction pathway transcription factor microarray gene expression conditionally activated pathway;
23.Domain Organization of Long Autotransporter Signal Sequences

机译：长自转运信号序列的域组织
- 作者：Jan A. Hiss;Gisbert Schneider
- 期刊名称：《Bioinformatics and Biology Insights》 | 2009年第-1期
- bacterial autotransporter sequence analysis pattern protein targeting signal peptide protein trafficking;
24.An Improved Approach for Mapping Quantitative Trait Loci in a Pseudo-Testcross: Revisiting a Poplar Mapping Study

机译：伪测交中数量性状基因座定位的一种改进方法：重新研究杨树定位研究
- 作者：Song Wu;Jie Yang;Youjun Huang;Yao Li;Tongming Yin;Stan D. Wullschleger;Gerald A. Tuskan;Rongling Wu
- 期刊名称：《Bioinformatics and Biology Insights》 | 2010年第-1期
- QTL pseudo-testcross intercross marker poplar;
25.Evolutionary Pattern of N-Glycosylation Sequon Numbers in Eukaryotic ABC Protein Superfamilies

机译：真核ABC蛋白超家族中N-糖基化序列数的进化模式。
- 作者：R. Shyama Prasad Rao;Ole Thomsen Buus;Bernd Wollenweber
- 期刊名称：《Bioinformatics and Biology Insights》 | 2010年第-1期
- ABC proteins evolution N-glycosylation sequons probability proline;
26.Effect of Diet Supplementation on the Expression of Bovine Genes Associated with Fatty Acid Synthesis and Metabolism

机译：日粮添加对与脂肪酸合成代谢相关的牛基因表达的影响
- 作者：Sandeep J. Joseph;Kelly R. Robbins;Enrique Pavan;Scott L. Pratt;Susan K. Duckett;Romdhane Rekaya
- 期刊名称：《Bioinformatics and Biology Insights》 | 2010年第-1期
- affymetrix bovine array fatty acid metabolism RT-qPCR conjugated linoleic acid stearoyl-CoA desaturase fatty acid synthase acetyl-coenzyme A carboxylase;
27.Insights into Protein Sequence and Structure-Derived Features Mediating 3D Domain Swapping Mechanism using Support Vector Machine Based Approach

机译：使用基于支持向量机的方法深入研究介导3D域交换机制的蛋白质序列和结构衍生特征
- 作者：Khader Shameer;Ganesan Pugalenthi;Krishna Kumar Kandaswamy;Ponnuthurai N. Suganthan;Govindaraju Archunan;Ramanathan Sowdhamini
- 期刊名称：《Bioinformatics and Biology Insights》 | 2010年第-1期
- 3D domain swapping domain swap machine learning SVM feature selection;
28.Normal Mode Flexible Fitting of High-Resolution Structures of Biological Molecules Toward SAXS Data

机译：生物分子的高分辨率结构对SAXS数据的正态模态拟合
- 作者：Christian Gorba;Florence Tama
- 期刊名称：《Bioinformatics and Biology Insights》 | 2010年第-1期
- coarse-grained model conformational change modeling pair distribution function protein trusted region method;
29.A Plausible Role for the Presence of Internal Shine-Dalgarno Sites

机译：内部闪耀-Dalgarno网站存在的合理作用
- 作者：Lalit Ponnala
- 期刊名称：《Bioinformatics and Biology Insights》 | 2010年第-1期
- codon Shine-Dalgarno hybridization translation gene expression;
30.Comparative in Silico Analyses of Cpeb1–4 with Functional Predictions

机译：具有功能预测的Cpeb1-4的计算机模拟分析比较
- 作者：Xiang-Ping Wang;Nigel G.F. Cooper
- 期刊名称：《Bioinformatics and Biology Insights》 | 2010年第-1期
- in silico Cpeb bioinformatics isoforms paralogs orthologs alternative splicing;
31.Expression of Metabolic Tissue Remodeling Oxidative Stress and Inflammatory Pathways in Mammary Tissue During Involution in Lactating Dairy Cows

机译：泌乳奶牛退化过程中乳腺组织中代谢组织重塑氧化应激和炎症途径的表达
- 作者：Paola Piantoni;Ping Wang;James K. Drackley;Walter L. Hurley;Juan J. Loor
- 期刊名称：《Bioinformatics and Biology Insights》 | 2010年第-1期
- transcriptomics lactation involution dairy;
32.Candidate Single Nucleotide Polymorphism Markers for Arsenic Responsiveness of Protein Targets

机译：候选单核苷酸多态性标记蛋白靶标的砷响应性。
- 作者：Raphael D. Isokpehi;Hari H.P. Cohly;Matthew N. Anyanwu;Rajendram V. Rajnarayanan;Paul B. Tchounwou;Udensi K. Udensi;Barbara E. Graham-Evans
- 期刊名称：《Bioinformatics and Biology Insights》 | 2010年第-1期
- arsenic keratinocytes non-synonymous single nucleotide polymorphisms toxicogenomics skin cancer vicinal cysteines;
33.An Allergen Portrait Gallery: Representative Structures and an Overview of IgE Binding Surfaces

机译：过敏原肖像馆：代表性结构和IgE结合表面概述
- 作者：Catherine H. Schein;Ovidiu Ivanciuc;Terumi Midoro-Horiuti;Randall M. Goldblum;Werner Braun
- 期刊名称：《Bioinformatics and Biology Insights》 | 2010年第-1期
- allergen PFAM classification cross-reactiviy allergen specific motifs IgE epitopes structural database of allergenic proteins specific immunotherapy;
34.Periodicity Detection Method for Small-Sample Time Series Datasets

机译：小样本时间序列数据集的周期性检测方法
- 作者：Daisuke Tominaga
- 期刊名称：《Bioinformatics and Biology Insights》 | 2010年第-1期
- periodicity detection gene expression time series information criterion discrete Fourier transform circadian rhythm;
35.Computational Analysis of Molecular Interaction Networks Underlying Change of HIV-1 Resistance to Selected Reverse Transcriptase Inhibitors

机译：HIV-1对所选逆转录酶抑制剂抗性变化的分子相互作用网络的计算分析
- 作者：Marcin Kierczak;Michał Dramiński;Jacek Koronacki;Jan Komorowski
- 期刊名称：《Bioinformatics and Biology Insights》 | 2010年第-1期
- drug resistance feature selection MCFS interdependency networks HIV;
36.Proteomic Analysis in Diabetic Cardiomyopathy using Bioinformatics Approach

机译：使用生物信息学方法对糖尿病性心肌病进行蛋白质组学分析
- 作者：Allam Appa Rao;Hanuman Thota;Ramamurthy Adapala;Suresh Babu Changalasetty;Ramachandra Sridhar Gumpeny;Annapurna Akula;Lalitha Saroja Thota;Siva Reddy Challa;M.R. Narasinga Rao;Undurti N. Das
- 期刊名称：《Bioinformatics and Biology Insights》 | 2008年第-1期
- diabetes cardiomyopathy protein kinase C calcium metallomatrix proteins advanced glycation end products;
37.Structural Re-Alignment in an Immunogenic Surface Region of Ricin A Chain

机译：蓖麻毒素A链的免疫原性表面区域的结构重排。
- 作者：Adam T. Zemla;Carol L. Ecale Zhou
- 期刊名称：《Bioinformatics and Biology Insights》 | 2008年第-1期
- protein structure alignment functional alignment residue similarity residue-residue correspondence alignment method structure comparison;
38.The HapMap Resource is Providing New Insights into Ourselves and its Application to Pharmacogenomics

机译：HapMap资源正在为我们自身及其在药物基因组学中的应用提供新见解
- 作者：Wei Zhang;Mark J. Ratain;M. Eileen Dolan
- 期刊名称：《Bioinformatics and Biology Insights》 | 2008年第-1期
- HapMap lymphoblastoid cell lines genotype gene expression population genetics;
39.Coarse-Grained Models Reveal Functional Dynamics - I. Elastic Network Models – Theories Comparisons and Perspectives

机译：粗粒度模型揭示了功能动力学-一。弹性网络模型-理论比较和观点
- 作者：Lee-Wei Yang;Choon-Peng Chng
- 期刊名称：《Bioinformatics and Biology Insights》 | 2008年第-1期
- normal mode analysis potential surface low-frequency motions GNM NMR X-ray B-factors;
40.Characterization of Non-Trivial Neighborhood Fold Constraints from Protein Sequences using Generalized Topohydrophobicity

机译：使用广义拓扑疏水性从蛋白质序列表征非排他性邻域折叠约束。
- 作者：Guillaume Fourty;Isabelle Callebaut;Jean-Paul Mornon
- 期刊名称：《Bioinformatics and Biology Insights》 | 2008年第-1期
- long-range contact solvent accessibility multiple alignment sequence profile hydrophobicity regular secondary structures;
41.HMM_RA: An Improved Method for Alpha-Helical Transmembrane Protein Topology Prediction

机译：HMM_RA：一种用于α-螺旋跨膜蛋白拓扑预测的改进方法
- 作者：Jing Hu;Changhui Yan
- 期刊名称：《Bioinformatics and Biology Insights》 | 2008年第-1期
- Alpha helical transmembrane HMM Reduced alphabet Topology prediction;
42.Estimating the Fraction of Non-Coding RNAs in Mammalian Transcriptomes

机译：估计哺乳动物转录组中非编码RNA的分数。
- 作者：Yurong Xin;Giulio Quarta;Hin Hark Gan;Tamar Schlick
- 期刊名称：《Bioinformatics and Biology Insights》 | 2008年第-1期
- randomness test fraction model putative non-coding RNA;
43.Effects of Feeding Periods of High Cholesterol and Saturated Fat Diet on Blood Biochemistry and Hydroxyproline Fractions in Rabbits

机译：高胆固醇和饱和脂肪饮食的饲喂期对家兔血液生化和羟脯氨酸组分的影响
- 作者：Mohamed A.K. Abdelhalim;N.J. Siiddiqi;A.S. ALhomida;Mohammed S. Al-Ayed
- 期刊名称：《Bioinformatics and Biology Insights》 | 2008年第-1期
- cholesterol hydroxyproline rabbits feeding periods atherosclerosis;
44.Utility of Computational Methods to Identify the Apoptosis Machinery in Unicellular Eukaryotes

机译：计算方法在单细胞真核生物中识别凋亡机制的实用程序。
- 作者：Pierre Marcel Durand;Theresa Louise Coetzer
- 期刊名称：《Bioinformatics and Biology Insights》 | 2008年第-1期
- bioinformatics programmed cell death apoptosis protozoa;
45.A Unified Discussion on the Concept of Score Functions Used in the Context of Nonparametric Linkage Analysis

机译：关于非参数链接分析中得分函数概念的统一讨论
- 作者：Lars Ängquist
- 期刊名称：《Bioinformatics and Biology Insights》 | 2008年第-1期
- nonparametric linkage analysis allele sharing genetic disease models inheritance vectors score functions families of score function definitions genetic models NCP-optimality IBD-sharing structures equivalence of score functionse;
46.Searching for Factors that Distinguish Disease-Prone and Disease-Resistant Prions via Sequence Analysis

机译：通过序列分析寻找区分疾病Disease和抗病Pr病毒的因素
- 作者：Kanaka Durga Kedarisetti;Scott Dick;Lukasz Kurgan
- 期刊名称：《Bioinformatics and Biology Insights》 | 2008年第-1期
- prions prion misfolding point mutations sequence alignment exchange groups conformational transition;
47.A New Test Statistic Based on Shrunken Sample Variance for Identifying Differentially Expressed Genes in Small Microarray Experiments

机译：基于缩小样本方差的新测试统计量用于鉴定小型微阵列实验中差异表达的基因
- 作者：Akihiro Hirakawa;Yasunori Sato;Chikuma Hamada;Isao Yoshimura
- 期刊名称：《Bioinformatics and Biology Insights》 | 2008年第-1期
- differentially expressed genes false discovery rate microarray shrunken sample variance significance analysis of microarray t-type score;
48.Distribution of Polymorphic and Non-Polymorphic Microsatellite Repeats in Xenopus tropicalis

机译：热带非洲爪蟾多态和非多态微卫星重复的分布。
- 作者：Zhenkang Xu;Laura Gutierrez;Matthew Hitchens;Steve Scherer;Amy K. Sater;Dan E. Wells
- 期刊名称：《Bioinformatics and Biology Insights》 | 2008年第-1期
- microsatellite polymorphism Xenopus genome;
49.Coarse-Grained Models Reveal Functional Dynamics – II. Molecular Dynamics Simulation at the Coarse-Grained Level – Theories and Biological Applications

机译：粗粒度模型揭示了功能动力学– II。粗粒级的分子动力学模拟–理论与生物学应用
- 作者：Choon-Peng Chng;Lee-Wei Yang
- 期刊名称：《Bioinformatics and Biology Insights》 | 2008年第-1期
- conformational transitions molecular mechanics Gō-model Boltzmann-Inversion simulation time-step;
50.Ontologies for Bioinformatics

机译：生物信息学本体
- 作者：Nadine Schuurman;Agnieszka Leszczynski
- 期刊名称：《Bioinformatics and Biology Insights》 | 2008年第-1期
- ontologies semantics biological databases bioinformatics Gene Ontology;
51.Borges Dilemma Fundamental Laws and Systems Biology

机译：博尔赫斯困境基本法和系统生物学
- 作者：Ping Ao
- 期刊名称：《Bioinformatics and Biology Insights》 | 2008年第-1期
52.Topological Properties of Co-Occurrence Networks in Published Gene Expression Signatures

机译：共发网络在已发表的基因表达签名中的拓扑性质
- 作者：Heiko Muller;Francesco Acquati
- 期刊名称：《Bioinformatics and Biology Insights》 | 2008年第-1期
- co-occurrence network PubLiME scale-free network hierarchical modularity date hub party hub;
53.Evaluation of Combining Several Statistical Methods with a Flexible Cutoff for Identifying Differentially Expressed Genes in Pairwise Comparison of EST Sets

机译：EST集的成对比较中几种统计方法与灵活截断相结合识别差异表达基因的评价
- 作者：Angelica Lindlöf;Marcus Bräutigam;Aakash Chawade;Olof Olsson;Björn Olsson
- 期刊名称：《Bioinformatics and Biology Insights》 | 2008年第-1期
- expressed sequence tags statistical methods differentially expressed genes;
54.Methodology for Constructing Problem Definitions in Bioinformatics

机译：在生物信息学中构建问题定义的方法论
- 作者：Amy M. Hauth;Gertraud Burger
- 期刊名称：《Bioinformatics and Biology Insights》 | 2008年第-1期
- problem formulation tool development guidelines;
55.Neuroinformatics: From Bioinformatics to Databasing the Brain

机译：神经信息学：从生物信息学到大脑数据库
- 作者：Thomas M. Morse
- 期刊名称：《Bioinformatics and Biology Insights》 | 2008年第-1期
- comparison similarity difference overlap understand between;
56.Unsupervised Meta-Analysis on Diverse Gene Expression Datasets Allows Insight into Gene Function and Regulation

机译：对各种基因表达数据集进行无监督的荟萃分析可深入了解基因功能和调控
- 作者：Julia C. Engelmann;Roland Schwarz;Steffen Blenk;Torben Friedrich;Philipp N. Seibel;Thomas Dandekar;Tobias Müller
- 期刊名称：《Bioinformatics and Biology Insights》 | 2008年第-1期
- Arabidopsis thaliana microarray unsupervised meta-analysis function prediction database gene expression;
57.The Use of Artificial Neural Networks in Prediction of Congenital CMV Outcome from Sequence Data

机译：人工神经网络在先天性CMV结果预测中的应用
- 作者：Ravit Arav-Boger;Yuval S. Boger;Charles B. Foster;Zvi Boger
- 期刊名称：《Bioinformatics and Biology Insights》 | 2008年第-1期
58.Normalization and Gene p-Value Estimation: Issues in Microarray Data Processing

机译：归一化和基因p值估计：微阵列数据处理中的问题。
- 作者：Katrin Fundel;Robert Küffner;Thomas Aigner;Ralf Zimmer
- 期刊名称：《Bioinformatics and Biology Insights》 | 2008年第-1期
- expression data normalization regulated genes data processing;
59.Evidence of Highly Regulated Genes (in-Hubs) in Gene Networks of Saccharomyces Cerevisiae

机译：酿酒酵母基因网络中高度调控的基因（集线器）的证据
- 作者：Jesper Lundström;Johan Björkegren;Jesper Tegnér
- 期刊名称：《Bioinformatics and Biology Insights》 | 2008年第-1期
- gene expression network algorithm transcription regulation protein-protein interactions in-hubs;
60.Designing Toxicogenomics Studies that use DNA Array Technology

机译：使用DNA阵列技术设计毒物基因组学研究
- 作者：Robert R. Delongchamp;Cruz Velasco;Varsha G. Desai;Taewon Lee;James C. Fuscoe
- 期刊名称：《Bioinformatics and Biology Insights》 | 2008年第-1期
61.Association Between a Prognostic Gene Signature and Functional Gene Sets

机译：预后基因签名和功能基因集之间的关联。
- 作者：Manuela Hummel;Klaus H. Metzeler;Christian Buske;Stefan K. Bohlander;Ulrich Mansmann
- 期刊名称：《Bioinformatics and Biology Insights》 | 2008年第-1期
62.Gene Copy Number Analysis for Family Data Using Semiparametric Copula Model

机译：使用半参数Copula模型分析家庭数据的基因拷贝数
- 作者：Ao Yuan;Guanjie Chen;Zhong-Cheng Zhou;George Bonney;Charles Rotimi
- 期刊名称：《Bioinformatics and Biology Insights》 | 2008年第-1期
- cluster copula family data gene copy number semiparametric model;
63.IMAGE: A New Tool for the Prediction of Transcription Factor Binding Sites

机译：图像：预测转录因子结合位点的新工具
- 作者：R. Casilli;A. Marongiu;S. Melchionna;P. Palazzari;R. Paparcone;V. Rosato
- 期刊名称：《Bioinformatics and Biology Insights》 | 2008年第-1期
64.Identification and Investigation of Drosophila Postsynaptic Density Homologs

机译：果蝇突触后密度同源物的鉴定与研究
- 作者：Faith L.W. Liebl;David E. Featherstone
- 期刊名称：《Bioinformatics and Biology Insights》 | 2008年第-1期
65.Identification of the RGG Box Motif in Shadoo: RNA-Binding and Signaling Roles?

机译：Shadoo中RGG盒基元的鉴定：RNA结合和信号传导作用？
- 作者：Susan M. Corley;Jill E. Gready
- 期刊名称：《Bioinformatics and Biology Insights》 | 2008年第-1期
- prion protein RGG motif RNA-binding protein Shadoo comparative genomics conceptual biology methylation phosphorylation;
66.Using a Seed-Network to Query Multiple Large-Scale Gene Expression Datasets from the Developing Retina in Order to Identify and Prioritize Experimental Targets

机译：使用种子网络从发育中的视网膜查询多个大规模基因表达数据集以便识别和确定实验目标的优先级
- 作者：Laura A. Hecker;Timothy C. Alcon;Vasant G. Honavar;M. Heather West Greenlee
- 期刊名称：《Bioinformatics and Biology Insights》 | 2008年第-1期
- gene expression gene network cell fate determination retina photoreceptor;
67.Rarity of Somatic Mutation and Frequency of Normal Sequence Variation Detected in Sporadic Colon Adenocarcinoma Using High-Throughput cDNA Sequencing

机译：高通量cDNA测序技术检测散发性结肠腺癌体细胞突变的罕见性和正常序列变异的频率
- 作者：Takatsugu Kan;Bogdan C. Paun;Yuriko Mori;Fumiaki Sato;Zhe Jin;James P. Hamilton;Tetsuo Ito;Yulan Cheng;Stefan David;Alexandru V. Olaru;Jian Yang;Rachana Agarwal;John M. Abraham;Stephen J. Meltzer
- 期刊名称：《Bioinformatics and Biology Insights》 | 2007年第-1期
68.Prediction of Functional Class of Proteins and Peptides Irrespective of Sequence Homology by Support Vector Machines

机译：支持向量机预测蛋白质和多肽的功能类别而与序列同源性无关
- 作者：Zhi Qun Tang;Hong Huang Lin;Hai Lei Zhang;Lian Yi Han;Xin Chen;Yu Zong Chen
- 期刊名称：《Bioinformatics and Biology Insights》 | 2007年第-1期
- machine learning method peptide function protein family protein function protein function prediction support vector machines;
69.GSMA: Gene Set Matrix Analysis An Automated Method for Rapid Hypothesis Testing of Gene Expression Data

机译：GSMA：基因集矩阵分析一种用于基因表达数据的快速假设检验的自动化方法
- 作者：Chris Cheadle;Tonya Watkins;Jinshui Fan;Marc A. Williams;Steven Georas;John Hall;Antony Rosen;Kathleen C. Barnes
- 期刊名称：《Bioinformatics and Biology Insights》 | 2007年第-1期
70.Screening the Single Nucleotide Polymorphisms in Patients with Internal Carotid Artery Stenosis by Oligonucleotide-Based Custom DNA Array

机译：基于寡核苷酸的定制DNA阵列筛选颈内动脉狭窄患者的单核苷酸多态性
- 作者：Kenji Nakai;Mayu Oyanagi;Jiro Hitomi;Kuniaki Ogasawara;Takashi Inoue;Masakazu Kobayashi;Keiko Nakai;Akira suwabe;Wataru Habano;Toshiaki Baba;Hiroshi Yoshida;Akira Ogawa
- 期刊名称：《Bioinformatics and Biology Insights》 | 2007年第-1期
- atherosclerosis carotid artery stenosis polymorphism plasminogen activator inhibitor 1;
- 5 10-methylenetetra hydrofolate reductase;
71.Software for Quantifying and Simulating Microsatellite Genotyping Error

机译：量化和模拟微卫星基因分型误差的软件
- 作者：Paul C.D. Johnson;Daniel T. Haydon
- 期刊名称：《Bioinformatics and Biology Insights》 | 2007年第-1期
- microsatellites genotyping error allelic dropout false alleles maximum likelihood software;
72.Including Functional Annotations and Extending the Collection of Structural Classifications of Protein Loops (ArchDB)

机译：包括功能注释并扩展蛋白质环（ArchDB）的结构分类的集合
- 作者：Antoni Hermoso;Jordi Espadaler;E Enrique Querol;Francesc X. Aviles;Michael J.E. Sternberg;Baldomero Oliva;Narcis Fernandez-Fuentes
- 期刊名称：《Bioinformatics and Biology Insights》 | 2007年第-1期
- function annotation loop structure classification loop modeling;
73.The Penna Model of Biological Aging

机译：生物衰老的Penna模型
- 作者：D. Stauffer
- 期刊名称：《Bioinformatics and Biology Insights》 | 2007年第-1期
- Monte Carlo simulations life death reproduction;
74.Peptide Vocabulary Analysis Reveals Ultra-Conservation and Homonymity in Protein Sequences

机译：肽词汇分析揭示了蛋白质序列中的超保守性和同义性
- 作者：Derek Gatherer
- 期刊名称：《Bioinformatics and Biology Insights》 | 2007年第-1期
- peptide vocabulary vocabulary analysis word detection motif protein structure bioinformatics gene families genome signature peptide conservation peptide homonymity;
75.Beyond Field Effect: Analysis of Shrunken Centroids in Normal Esophageal Epithelia Detects Concomitant Esophageal Adenocarcinoma

机译：超越场效应：正常食管上皮细胞萎缩质心的分析可检测到伴随的食管腺癌
- 作者：Florin M. Selaru;Suna Wang;Jing Yin;Karsten Schulmann;Yan Xu;Yuriko Mori;Alexandru V. Olaru;Fumiaki Sato;James P. Hamilton;John M. Abraham;Paul Schneider;Bruce D. Greenwald;Jan Brabender;Stephen J. Meltzer
- 期刊名称：《Bioinformatics and Biology Insights》 | 2007年第-1期
76.Identifying Stress Transcription Factors Using Gene Expression and TF-Gene Association Data

机译：使用基因表达和TF基因关联数据识别胁迫转录因子
- 作者：Wei-Sheng Wu;Bor-Sen Chen
- 期刊名称：《Bioinformatics and Biology Insights》 | 2007年第-1期
- stress transcription factor gene expression data and TF-gene association data;
77.High-Throughput Sequencing of miRNAs Reveals a Tissue Signature in Gastric Cancer and Suggests Novel Potential Biomarkers

机译：miRNA的高通量测序揭示了胃癌的组织特征并提出了新的潜在生物标志物
- 作者：Sylvain Darnet;Fabiano C Moreira;Igor G Hamoy;Rommel Burbano;André Khayat;Aline Cruz;Leandro Magalhães;Artur Silva;Sidney Santos;Samia Demachki;Monica Assumpção;Paulo Assumpção;Ândrea Ribeiro-dos-Santos
- 期刊名称：《Bioinformatics and Biology Insights》 | 2015年第Suppl 1期
- gastric cancer miRnome biomarkers NGS;
78.The Widening Gulf between Genomics Data Generation and Consumption: A Practical Guide to Big Data Transfer Technology

机译：基因组学数据生成和消费之间不断扩大的海湾：大数据传输技术实用指南
- 作者：Frank A. Feltus;Joseph R. Breen III;Juan Deng;Ryan S. Izard;Christopher A. Konger;Walter B. Ligon III;Don Preuss;Kuang-Ching Wang
- 期刊名称：《Bioinformatics and Biology Insights》 | 2015年第Suppl 1期
- data life cycle Big Data networks software-defined networking;
79.Gene Coexpression Networks in Human Brain Developmental Transcriptomes Implicate the Association of Long Noncoding RNAs with Intellectual Disability

机译：人类大脑发育转录组中的基因共表达网络暗示长非编码RNA与智障的关联。
- 作者：Brian L. Gudenas;Liangjiang Wang
- 期刊名称：《Bioinformatics and Biology Insights》 | 2015年第Suppl 1期
- lncRNAs coexpression network analysis intellectual disability;
80.Advanced Applications of RNA Sequencing and Challenges

机译：RNA测序的先进应用和挑战
- 作者：Yixing Han;Shouguo Gao;Kathrin Muegge;Wei Zhang;Bing Zhou
- 期刊名称：《Bioinformatics and Biology Insights》 | 2015年第Suppl 1期
- RNA-seq data preprocessing differential gene expression alternative splicing variants detection pathway analysis co-expression network systems biology;
81.Evolutionary Character of Alternative Splicing in Plants

机译：植物选择性剪接的进化特征
- 作者：Chengjun Zhang;Hong Yang;Huizhao Yang
- 期刊名称：《Bioinformatics and Biology Insights》 | 2015年第Suppl 1期
- alternative splicing comparative analyses conservation ability stress response;
82.RNA Sequencing in Schizophrenia

机译：精神分裂症的RNA测序
- 作者：Xin Li;Shaolei Teng
- 期刊名称：《Bioinformatics and Biology Insights》 | 2015年第Suppl 1期
- RNA sequencing (RNA-Seq) schizophrenia (SCZ) induced pluripotent stem cells (iPSCs);
83.Current Developments in RNA Sequence Analysis

机译：RNA序列分析的最新进展
- 作者：Jianping Zhang;Shaolei Teng;Cuncong Zhong;Bo Wang;Jie Wu
- 期刊名称：《Bioinformatics and Biology Insights》 | 2015年第Suppl 1期
84.Identification and Expression Analysis of Ribosome Biogenesis Factor Co-orthologs in Solanum lycopersicum

机译：茄子茄属核糖体生物发生因子同源基因的鉴定与表达分析
- 作者：Stefan Simm;Sotirios Fragkostefanakis;Puneet Paul;Mario Keller;Jens Einloft;Klaus-Dieter Scharf;Enrico Schleiff
- 期刊名称：《Bioinformatics and Biology Insights》 | 2015年第-1期
- next generation sequencing orthologous prediction ribosome biogenesis MACE qRT-PCR tomato;
85.A Systems Biology Approach Reveals the Dose- and Time-Dependent Effect of Primary Human Airway Epithelium Tissue Culture After Exposure to Cigarette Smoke In Vitro

机译：一种系统生物学方法揭示了体外暴露于香烟烟雾后原代人气道上皮组织培养物的剂量和时间依赖性效应
- 作者：Carole Mathis;Stephan Gebel;Carine Poussin;Vincenzo Belcastro;Alain Sewer;Dirk Weisensee;Arnd Hengstermann;Sam Ansari;Sandra Wagner;Manuel C Peitsch;Julia Hoeng
- 期刊名称：《Bioinformatics and Biology Insights》 | 2015年第-1期
- air liquid interface cigarette smoke mechanistic investigations organotypic culture systems biology;
86.An Interpretation of the Ancestral Codon from Miller’s Amino Acids and Nucleotide Correlations in Modern Coding Sequences

机译：现代编码序列中米勒氨基酸对祖先密码子的解释和核苷酸相关性
- 作者：Nicolas Carels;Miguel Ponce de Leon
- 期刊名称：《Bioinformatics and Biology Insights》 | 2015年第-1期
- genomics ancestral codon purine bias short-range correlations protein features;
87.Cross-Disciplinary Detection and Analysis of Network Motifs

机译：网络主题的跨学科检测与分析
- 作者：Ngoc Tam L Tran;Luke DeLuccia;Aidan F McDonald;Chun-Hsi Huang
- 期刊名称：《Bioinformatics and Biology Insights》 | 2015年第-1期
- network motifs biological networks social networks directed network undirected network network motif detection;
88.Reverse enGENEering of Regulatory Networks from Big Data: A Roadmap for Biologists

机译：大数据监管网络的逆向工程：生物学家的路线图
- 作者：Xiaoxi Dong;Anatoly Yambartsev;Stephen A Ramsey;Lina D Thomas;Natalia Shulzhenko;Andrey Morgun
- 期刊名称：《Bioinformatics and Biology Insights》 | 2015年第-1期
- network reconstruction network interrogation systems biology big data data integration inter-omics network transkingdom network;
89.Metagenomics: Tools and Insights for Analyzing Next-Generation Sequencing Data Derived from Biodiversity Studies

机译：元基因组学：分析生物多样性研究衍生的下一代测序数据的工具和见解
- 作者：Anastasis Oulas;Christina Pavloudi;Paraskevi Polymenakou;Georgios A Pavlopoulos;Nikolas Papanikolaou;Georgios Kotoulas;Christos Arvanitidis;Ioannis Iliopoulos
- 期刊名称：《Bioinformatics and Biology Insights》 | 2015年第-1期
- metagenomics next-generation sequencing computational tools data analysis;
90.Computational and in vitro Investigation of miRNA-Gene Regulations in Retinoblastoma Pathogenesis: miRNA Mimics Strategy

机译：视网膜母细胞瘤发病机制中miRNA基因调控的计算和体外研究：miRNA模仿策略
- 作者：Nalini Venkatesan;Perinkulam Ravi Deepa;Vikas Khetan;Subramanian Krishnakumar
- 期刊名称：《Bioinformatics and Biology Insights》 | 2015年第-1期
- bio-informatics analysis miRNA-mRNA mimics retinoblastoma;
91.Prediction of O-glycosylation Sites Using Random Forest and GA-Tuned PSO Technique

机译：随机森林和GA调整PSO技术预测O-糖基化位点
- 作者：Hebatallah Hassan;Amr Badr;MB Abdelhalim
- 期刊名称：《Bioinformatics and Biology Insights》 | 2015年第-1期
- O-glycosylation imbalanced learning genetic algorithm PSO random forest;
92.High-Throughput miRNA Sequencing Reveals a Field Effect in Gastric Cancer and Suggests an Epigenetic Network Mechanism

机译：高通量miRNA测序揭示了胃癌的场效应并提出了表观遗传网络机制
- 作者：Monica B Assumpção;Fabiano C Moreira;Igor G Hamoy;Leandro Magalhães;Amanda Vidal;Adenilson Pereira;Rommel Burbano;André Khayat;Artur Silva;Sidney Santos;Samia Demachki;Ândrea Ribeiro-dos-Santos;Paulo Assumpção
- 期刊名称：《Bioinformatics and Biology Insights》 | 2015年第-1期
- high-throughput sequencing miRnome miRNA field effect gastric cancer epigenetic;
93.A Simple Rank Product Approach for Analyzing Two Classes

机译：分析两个类别的简单等级积方法
- 作者：Tae Young Yang
- 期刊名称：《Bioinformatics and Biology Insights》 | 2015年第-1期
- change of variable chi-squared approximation log-transformation rank product statistic two-class setting;
94.BioImg.org: A Catalog of Virtual Machine Images for the Life Sciences

机译：BioImg.org：生命科学虚拟机映像目录
- 作者：Martin Dahlö;Frédéric Haziza;Aleksi Kallio;Eija Korpelainen;Erik Bongcam-Rudloff;Ola Spjuth
- 期刊名称：《Bioinformatics and Biology Insights》 | 2015年第-1期
- catalogue virtual machine image virtual appliance container software repository cloud computing;
95.PPCheck: A Webserver for the Quantitative Analysis of Protein–Protein Interfaces and Prediction of Residue Hotspots

机译：PPCheck：Web服务器用于蛋白质-蛋白质界面的定量分析和残留热点的预测
- 作者：Anshul Sukhwal;Ramanathan Sowdhamini
- 期刊名称：《Bioinformatics and Biology Insights》 | 2015年第-1期
- algorithm protein–protein interactions protein hotspots computational alanine scanning residue conservation protein–protein docking;
96.Cross-species Transcriptomic Comparison of In Vitro and In Vivo Mammalian Neural Cells

机译：体外和体内哺乳动物神经细胞的跨物种转录组学比较
- 作者：Peter R. LoVerso;Christopher M. Wachter;Feng Cui
- 期刊名称：《Bioinformatics and Biology Insights》 | 2015年第-1期
- transcriptome mammalian astrocytes neurons OPCs primary culture;
97.A Computational Pipeline for Cross-Species Analysis of RNA-seq Data Using R and Bioconductor

机译：使用R和生物导体进行RNA序列数据的跨物种分析的计算管道
- 作者：Peter R. LoVerso;Feng Cui
- 期刊名称：《Bioinformatics and Biology Insights》 | 2015年第-1期
- RNA-seq computational pipeline cross-species;
98.DDA: A Novel Network-Based Scoring Method to Identify Disease–Disease Associations

机译：DDA：一种基于网络的新颖计分方法可识别疾病-疾病关联
- 作者：Apichat Suratanee;Kitiporn Plaimas
- 期刊名称：《Bioinformatics and Biology Insights》 | 2015年第-1期
- disease-disease association network-based method prioritization technique scoring method;
99.Sequence Analysis and Evolutionary Studies of Reelin Proteins

机译：Reelin蛋白的序列分析与进化研究
- 作者：Malini Manoharan;Sayyed Auwn Muhammad;Ramanathan Sowdhamini
- 期刊名称：《Bioinformatics and Biology Insights》 | 2015年第-1期
- reelin protein glycoprotein domain repeats phylogeny domain architecture neurogenesis 3D modeling;
100.Homology-Based Prediction of Potential Protein–Protein Interactions between Human Erythrocytes and Plasmodium falciparum

机译：基于同源性的人类红细胞与恶性疟原虫之间潜在的蛋白质-蛋白质相互作用的预测
- 作者：Gayatri Ramakrishnan;Narayanaswamy Srinivasan;Ponnan Padmapriya;Vasant Natarajan
- 期刊名称：《Bioinformatics and Biology Insights》 | 2015年第-1期
- homology-based approaches host–parasite interactions protein–protein interactions Plasmodium falciparum;