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首页> 外文期刊>The Journal of Chemical Physics >Ab initio and force field molecular dynamics study of bulk organophosphorus and organochlorine liquid structures
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Ab initio and force field molecular dynamics study of bulk organophosphorus and organochlorine liquid structures

机译:散装有机磷和有机氯液体结构的AB初始和力场分子动力学研究

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We performed ab initio molecular dynamics (AIMD) simulations to benchmark bulk liquid structures and to evaluate results from all-atom force field molecular dynamics (FFMD) simulations with the generalized Amber force field (GAFF) for organophosphorus (OP) and organochlorine (OC) compounds. Our work also addresses the current and important topic of force field validation, applied here to a set of nonaqueous organic liquids. Our approach differs from standard treatments, which validate force fields based on thermodynamic data. Utilizing radial distribution functions (RDFs), our results show that GAFF reproduces the AIMD-predicted asymmetric liquid structures moderately well for OP compounds that contain bulky alkyl groups. Among the OCs, RDFs obtained from FFMD overlap well with AIMD results, with some offsets in position and peak structuring. However, re-parameterization of GAFF for some OCs is needed to reproduce fully the liquid structures predicted by AIMD. The offsets between AIMD and FFMD peak positions suggest inconsistencies in the developed force fields, but, in general, GAFF is able to capture short-ranged and long-ranged interactions of OPs and OCs observed in AIMD. Along with the local coordination structure, we also compared enthalpies of vaporization. Overall, calculated bulk properties from FFMD compared reasonably well with experimental values, suggesting that small improvements within the FF should focus on parameters that adjust the bulk liquid structures of these compounds.
机译:我们进行了从头算分子动力学(AIMD)模拟,以基准散装液体结构,并评估了有机磷(OP)和有机氯(OC)化合物的广义琥珀色力场分子动力学(FFMD)模拟的结果。我们的工作还涉及力场验证的当前和重要主题,在这里应用于一组非水有机液体。我们的方法不同于基于热力学数据验证力场的标准处理方法。利用径向分布函数(RDF),我们的结果表明,对于含有大量烷基的OP化合物,GAFF可以很好地再现AIMD预测的不对称液体结构。在OCs中,从FFMD获得的RDF与AIMD结果重叠良好,在位置和峰值结构上存在一些偏移。然而,需要对一些接触网的间隙进行重新参数化,以完全重现AIMD预测的液体结构。AIMD和FFMD峰值位置之间的偏移表明,所开发的力场不一致,但一般来说,GAFF能够捕捉在AIMD中观察到的OPs和OCs的短程和长程相互作用。除了局部配位结构,我们还比较了蒸发焓。总的来说,从FFMD计算出的体积性质与实验值相比相当好,这表明FF中的小改进应该集中在调整这些化合物的体积液体结构的参数上。

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