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X-Ray study on an artificial mung bean inhibitor complex with bovine β-trypsin in neat cyclohexane

机译:纯环己烷中与牛β-胰蛋白酶的人工绿豆抑制剂复合物的X射线研究

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摘要

The active trypsin inhibiting component, SPCl, was obtained during the synthesis of a 22-residue peptide with three disulfide bridges according to the mimic mung bean Bowman-Birk type inhibitor. The K_i value of SPCl is 1.2 * 10~(-7) M. In order to determine the topological structure of SPCl, X-ray diffraction studies were carried out on the complex of SPCl with bovine β-trypsin. Only the binding loop of SPCl resolved at 2.2 A resolution due to conformational flexibility of the other residues [1]. The amino acid sequence was re-determined and electrospray mass spectroscopy was also performed to ensure that no cleaving occurred on SPCl and the primary sequence of SPCl is correct. Because the protein is more rigid in nonaqueous medium as has been proved by others [2], we treated the complex of SPCl with neat cyclohexane and then subjected it to X-ray diffraction analysis, and the result showed that all the 22 residues of SPCl were located in the electron density map. So the topological structure of SPCl has been determined, suggesting that crystal treatment with cyclohexane may be used as a method to determine the conformation of the disordered regions in protein crystal structures.
机译:根据模拟绿豆Bowman-Birk型抑制剂,在具有三个二硫键的22残基肽的合成过程中获得了活性胰蛋白酶抑制组分SPC1。 SPCl的K_i值为1.2 * 10〜(-7)M。为了确定SPCl的拓扑结构,对SPCl与牛β-胰蛋白酶的复合物进行了X射线衍射研究。由于其他残基的构象柔性,仅SPC1的结合环以2.2A的分辨率分辨[1]。重新确定氨基酸序列,并进行电喷雾质谱分析以确保在SPC1上不发生裂解,并且SPC1的主要序列是正确的。正如其他人所证明的那样,由于蛋白质在非水介质中具有更高的刚性[2],我们用纯净的环己烷处理了SPCl的配合物,然后对其进行了X射线衍射分析,结果显示SPCl的所有22个残基位于电子密度图中。因此已经确定了SPC1的拓扑结构,这表明用环己烷进行的晶体处理可以用作确定蛋白质晶体结构中无序区域的构象的方法。

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