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Spatio-temporal dynamics of glycolysis in cell layers. A mathematical model

机译:细胞层中糖酵解的时空动态。数学模型

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Glycolytic oscillations occur in many cell types and have been intensively studied in yeast. Recent experimental and theoretical research has been focussed on the oscillatory dynamics and the synchronisation mechanism in stirred yeast cell suspensions. Here we are interested in the spatio-temporal organisation of glycolysis in cell layers. To this end we study a grid of a few thousand compartments each containing a cell. The intracellular dynamics is described by a core model of glycolysis. The compartments can exchange metabolites via diffusion. The conditions for oscillatory dynamics in a single compartment are investigated by bifurcation analysis. The spatio-temporal behaviour of the cell layer is studied by simulations. The model predicts the propagation of repetitive wave fronts induced by a substrate gradient. The formation of these waves crucially depends on the diffusive exchange of the reaction product between cells. Depending on the kinetic parameters complex spatio-temporal behaviour such as periodic termination of waves can arise. In these cases the cellular oscillation characteristics depend on the location of the cell in the array.
机译:糖酵解振荡发生在许多细胞类型中,并且已经在酵母中进行了深入研究。最近的实验和理论研究集中在搅拌的酵母细胞悬浮液中的振荡动力学和同步机制。在这里,我们对细胞层中糖酵解的时空组织感兴趣。为此,我们研究了一个由数千个隔室组成的网格,每个隔室包含一个单元。细胞内动力学由糖酵解的核心模型描述。这些隔室可以通过扩散交换代谢物。通过分叉分析研究了单个隔室中振荡动力学的条件。通过模拟研究了细胞层的时空行为。该模型预测由基体梯度引起的重复波阵面的传播。这些波的形成关键取决于细胞之间反应产物的扩散交换。根据动力学参数,可能会出现复杂的时空行为,例如波浪的周期性终止。在这些情况下,细胞振荡特性取决于细胞在阵列中的位置。

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