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首页> 外文期刊>The Journal of Chemical Physics >mu-tempered metadynamics: Artifact independent convergence times for wide hills
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mu-tempered metadynamics: Artifact independent convergence times for wide hills

机译:mu-tempered metadynamics:宽广的山体与工件无关的收敛时间

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摘要

Recent analysis of well-tempered metadynamics (WTmetaD) showed that it converges without mollification artifacts in the bias potential. Here, we explore how metadynamics heals mollification artifacts, how healing impacts convergence time, and whether alternative temperings may be used to improve efficiency. We introduce "mu-tempered" metadynamics as a simple tempering scheme, inspired by a related mollified adaptive biasing potential, that results in artifact independent convergence of the free energy estimate. We use a toy model to examine the role of artifacts in WTmetaD and solvated alanine dipeptide to compare the well-tempered and mu-tempered frameworks demonstrating fast convergence for hill widths as large as 60 degrees for mu TmetaD. (C) 2015 AIP Publishing LLC.
机译:最近对脾气暴躁的元动力学(WTmetaD)的分析表明,该算法收敛了,而偏电势中没有任何变质的假象。在这里,我们探讨了元动力学如何治愈运动化伪影,愈合如何影响收敛时间以及是否可以使用替代性的调温来提高效率。我们引入“ mu-tempered”元动力学作为一种简单的回火方案,并受到相关的平化自适应偏置电势的启发,从而导致自由能估计的工件无关收敛。我们使用玩具模型来检验伪影在WTmetaD和溶剂化的丙氨酸二肽中的作用,以比较脾气暴躁和mu脾气暴躁的框架,证明mu TmetaD的山宽高达60度时都具有快速收敛性。 (C)2015 AIP Publishing LLC。

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