首页> 外文期刊>Journal of Molecular Evolution >The squash aspartic proteinase inhibitor SQAPI is widely present in the cucurbitales, comprises a small multigene family, and is a member of the phytocystatin family
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The squash aspartic proteinase inhibitor SQAPI is widely present in the cucurbitales, comprises a small multigene family, and is a member of the phytocystatin family

机译:南瓜天冬氨酸蛋白酶抑制剂SQAPI广泛存在于葫芦科植物中,包括一个小的多基因家族,并且是植物半胱氨酸蛋白酶抑制剂家族的成员

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The squash (Cucurbita maxima) phloem exudate-expressed aspartic proteinase inhibitor (SQAPI) is a novel aspartic acid proteinase inhibitor, constituting a fifth family of aspartic proteinase inhibitors. However, a comparison of the SQAPI sequence to the phytocystatin (a cysteine proteinase inhibitor) family sequences showed similar to 30% identity. Modeling SQAPI onto the structure of oryzacystatin gave an excellent fit; regions identified as proteinase binding loops in cystatin coincided with regions of SQAPI identified as hypervariable, and tryptophan fluorescence changes were also consistent with a cystatin structure. We show that SQAPI exists as a small gene family. Characterization of mRNA and clone walking of genomic DNA (gDNA) produced 10 different but highly homologous SQAPI genes from Cucurbita maxima and the small family size was confirmed by Southern blotting, where evidence for at least five loci was obtained. Using primers designed from squash sequences, PCR of gDNA showed the presence of SQAPI genes in other members of the Cucurbitaceae and in representative members of Coriariaceae, Corynocarpaceae, and Begoniaceae. Thus, at least four of seven families of the order Cucurbitales possess member species with SQAPI genes, covering similar to 99% of the species in this order. A phylogenetic analysis of these Cucurbitales SQAPI genes indicated not only that SQAPI was present in the Cucurbitales ancestor but also that gene duplication has occurred during evolution of the order. Phytocystatins are widespread throughout the plant kingdom, suggesting that SQAPI has evolved recently from a phytocystatin ancestor. This appears to be the first instance of a cystatin being recruited as a proteinase inhibitor of another proteinase family.
机译:南瓜(葫芦科)韧皮部分泌物表达的天冬氨酸蛋白酶抑制剂(SQAPI)是一种新型的天冬氨酸蛋白酶抑制剂,构成了天冬氨酸蛋白酶抑制剂的第五家族。但是,SQAPI序列与植物半胱氨酸蛋白酶抑制剂(半胱氨酸蛋白酶抑制剂)家族序列的比较显示出相似的30%一致性。将SQAPI建模到稻谷胱抑素的结构上非常适合;在半胱氨酸蛋白酶抑制剂中被识别为蛋白酶结合环的区域与被确定为高变的SQAPI区域一致,并且色氨酸荧光变化也与半胱氨酸蛋白酶抑制剂结构一致。我们显示SQAPI作为一个小基因家族存在。 mRNA的鉴定和基因组DNA(gDNA)的克隆游走产生了来自南瓜属的10个不同但高度同源的SQAPI基因,并且通过Southern印迹证实了小家族大小,其中获得了至少五个基因座的证据。使用从南瓜序列设计的引物,gDNA的PCR显示SQAPI基因在葫芦科的其他成员中以及在茄形科,茄形科和秋海棠科的代表性成员中存在。因此,葫芦科的七个家族中至少有四个拥有具有SQAPI基因的成员物种,按该顺序覆盖了约99%的物种。这些葫芦科植物SQAPI基因的系统发育分析表明,不仅葫芦科祖先中存在SQAPI,而且在该顺序的进化过程中已经发生了基因重复。植物半胱氨酸蛋白酶抑制剂遍及整个植物界,这表明SQAPI最近已从植物半胱氨酸蛋白酶抑制剂的祖先演变而来。这似乎是胱抑素被招募为另一个蛋白酶家族的蛋白酶抑制剂的第一个实例。

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