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Linkage analysis of adult height in a large pedigree from a Dutch genetically isolated population.

机译:来自荷兰遗传隔离人群的大血统中成年人身高的连锁分析。

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摘要

Despite extensive research of genetic determinants of human adult height, the genes identified up until now allow to predict only a small proportion of the trait's variance. To identify new genes we analyzed 2,486 genotyped and phenotyped individuals in a large pedigree including 23,612 members in 18 generations. The pedigree was derived from a young genetically isolated Dutch population, where genetic heterogeneity is expected to be low and linkage disequilibrium has been shown to be increased. Complex segregation analysis confirmed high heritability of adult height, and suggested mixed model of height inheritance in this population. The estimates of the model parameters obtained from complex segregation analysis were used in parametric linkage analysis, which highlighted three genome-wide significant and additionally at least four suggestive loci involved in height. Significant peaks were located at the chromosomal regions 1p32 (LOD score = 3.35), 2p16 (LOD score = 3.29) and 16q24 (LOD score = 3.94). For the latter region, a strong association signal (FDR q < 0.05) was obtained for 19 SNPs, 17 of them were located in the CDH13 (cadherin 13) gene of which one (rs1035569) explained 1.5% of the total height variance.
机译:尽管对人类成年身高的遗传决定因素进行了广泛的研究,但迄今为止鉴定出的基因只能预测该性状变异的一小部分。为了鉴定新基因,我们分析了大谱系中的2486个基因型和表型个体,包括18代的23612个成员。该谱系来自年轻的遗传隔离的荷兰人,其遗传异质性很低,连锁不平衡性也有所增加。复杂的隔离分析证实了成年身高的遗传力,并提出了该种群中身高遗传的混合模型。从复杂分离分析中获得的模型参数的估计值用于参数连锁分析中,突出显示了三个基因组范围内的显着位点,以及至少四个涉及高度的暗示位点。显着峰位于染色体区域1p32(LOD分数= 3.35),2p16(LOD分数= 3.29)和16q24(LOD分数= 3.94)。对于后一个区域,获得了针对19个SNP的强关联信号(FDR q <0.05),其中17个位于CDH13(钙黏着蛋白13)基因中,其中一个(rs1035569)解释了总高度变异的1.5%。

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