掌桥科研
一站式科研服务平台
科技查新
收录引用
专题文献代查
外文数据库(机构版)
更多产品
首页
成为会员
我要充值
退出
我的积分:
中文会员
开通
中文文献批量获取
外文会员
开通
外文文献批量获取
我的订单
会员中心
我的包量
我的余额
登录/注册
文献导航
中文期刊
>
中文会议
>
中文学位
>
中国专利
>
外文期刊
>
外文会议
>
外文学位
>
外国专利
>
外文OA文献
>
外文科技报告
>
中文图书
>
外文图书
>
工业技术
基础科学
医药卫生
农业科学
教科文艺
经济财政
社会科学
哲学政法
其他
工业技术
基础科学
医药卫生
农业科学
教科文艺
经济财政
社会科学
哲学政法
其他
自然科学总论
数学、物理、化学、力学
天文学、地球科学
生物科技
医学、药学、卫生
航空航天、军事
农林牧渔
机械、仪表工业
化工、能源
冶金矿业
电子学、通信
计算机、自动化
土木、建筑、水利
交通运输
轻工业技术
材料科学
电工技术
一般工业技术
环境科学、安全科学
图书馆学、情报学
社会科学
其他
马克思主义、列宁主义、毛泽东思想、邓小平理论
哲学、宗教
社会科学总论
政治、法律
军事
经济
文化、科学、教育、体育
语言、文字
文学
艺术
历史、地理
自然科学总论
数理科学和化学
天文学、地球科学
生物科学
医药、卫生
农业科学
工业技术
交通运输
航空、航天
环境科学、安全科学
综合性图书
自然科学总论
数学、物理、化学、力学
天文学、地球科学
生物科技
医学、药学、卫生
航空航天、军事
农林牧渔
机械、仪表工业
化工、能源
冶金矿业
电子学、通信
计算机、自动化
土木、建筑、水利
交通运输
轻工业技术
材料科学
电工技术
一般工业技术
环境科学、安全科学
图书馆学、情报学
社会科学
其他
自然科学总论
数学、物理、化学、力学
天文学、地球科学
生物科技
医学、药学、卫生
航空航天、军事
农林牧渔
机械、仪表工业
化工、能源
冶金矿业
电子学、通信
计算机、自动化
土木、建筑、水利
交通运输
轻工业技术
电工技术
一般工业技术
环境科学、安全科学
图书馆学、情报学
社会科学
其他
自然科学总论
数学、物理、化学、力学
天文学、地球科学
生物科技
医学、药学、卫生
航空航天、军事
农林牧渔
机械、仪表工业
化工、能源
冶金矿业
电子学、通信
计算机、自动化
土木、建筑、水利
交通运输
轻工业技术
材料科学
电工技术
一般工业技术
环境科学、安全科学
图书馆学、情报学
社会科学
其他
美国国防部AD报告
美国能源部DE报告
美国航空航天局NASA报告
美国商务部PB报告
外军国防科技报告
美国国防部
美国参联会主席指示
美国海军
美国空军
美国陆军
美国海军陆战队
美国国防技术信息中心(DTIC)
美军标
美国航空航天局(NASA)
战略与国际研究中心
美国国土安全数字图书馆
美国科学研究出版社
兰德公司
美国政府问责局
香港科技大学图书馆
美国海军研究生院图书馆
OALIB数据库
在线学术档案数据库
数字空间系统
剑桥大学机构知识库
欧洲核子研究中心机构库
美国密西根大学论文库
美国政府出版局(GPO)
加利福尼亚大学数字图书馆
美国国家学术出版社
美国国防大学出版社
美国能源部文献库
美国国防高级研究计划局
美国陆军协会
美国陆军研究实验室
英国空军
美国国家科学基金会
美国战略与国际研究中心-导弹威胁网
美国科学与国际安全研究所
法国国际关系战略研究院
法国国际关系研究所
国际宇航联合会
美国防务日报
国会研究处
美国海运司令部
北约
盟军快速反应部队
北约浅水行动卓越中心
北约盟军地面部队司令部
北约通信信息局
北约稳定政策卓越中心
美国国会研究服务处
美国国防预算办公室
美国陆军技术手册
一般OA
科技期刊论文
科技会议论文
图书
科技报告
科技专著
标准
其它
美国卫生研究院文献
分子生物学
神经科学
药学
外科
临床神经病学
肿瘤学
细胞生物学
遗传学
公共卫生&环境&职业病
应用微生物学
全科医学
免疫学
动物学
精神病学
兽医学
心血管
放射&核医学&医学影像学
儿科
医学进展
微生物学
护理学
生物学
牙科&口腔外科
毒理学
生理学
医院管理
妇产科学
病理学
生化技术
胃肠&肝脏病学
运动科学
心理学
营养学
血液学
泌尿科学&肾病学
生物医学工程
感染病
生物物理学
矫形
外周血管病
药物化学
皮肤病学
康复学
眼科学
行为科学
呼吸学
进化生物学
老年医学
耳鼻喉科学
发育生物学
寄生虫学
病毒学
医学实验室检查技术
生殖生物学
风湿病学
麻醉学
危重病护理
生物材料
移植
医学情报
其他学科
人类生活必需品
作业;运输
化学;冶金
纺织;造纸
固定建筑物
机械工程;照明;加热;武器;爆破
物理
电学
人类生活必需品
作业;运输
化学;冶金
纺织;造纸
固定建筑物
机械工程;照明;加热;武器;爆破
物理
电学
马克思主义、列宁主义、毛泽东思想、邓小平理论
哲学、宗教
社会科学总论
政治、法律
军事
经济
文化、科学、教育、体育
语言、文字
文学
艺术
历史、地理
自然科学总论
数理科学和化学
天文学、地球科学
生物科学
医药、卫生
农业科学
工业技术
交通运输
航空、航天
环境科学、安全科学
综合性图书
主题
主题
题名
作者
关键词
摘要
高级搜索 >
外文期刊
外文会议
外文学位
外国专利
外文图书
外文OA文献
中文期刊
中文会议
中文学位
中国专利
中文图书
外文科技报告
清除
历史搜索
清空历史
首页
>
外文期刊
>
生物科技
>
mSystems
>2021年第4期
mSystems
中文名称:微系统
ISSN:
出版周期:
-
发文量:829
期刊论文
热门论文
年度选择
2023
第1期
第2期
第3期
2022
第1期
第2期
第3期
第4期
第5期
第6期
2021
第1期
第2期
第3期
第4期
第5期
第6期
2020
第1期
第2期
第3期
第4期
第5期
第6期
2019
第1期
第2期
第3期
第4期
第5期
第6期
2018
第1期
第2期
第3期
第4期
第5期
第6期
2017
第1期
第2期
第3期
第4期
第5期
第6期
2016
第1期
第2期
第3期
第4期
第5期
第6期
更多>>
全选(
0
)
清除
导出
共
113
条结果
1.
Differential Analysis of Longitudinal Methicillin-Resistant Staphylococcus aureus Colonization in Relation to Microbial Shifts in the Nasal Microbiome of Neonatal Piglets
作者:
Patel Shriram
;
Vlasblom Abel A.
;
Verstappen Koen M.Zomer Aldert L.Fluit Ad C.Rogers Malbert R. C.Wagenaar Jaap A.Claesson Marcus J.Duim Birgitta
期刊名称:
《msystems》
|
2021年第4期
关键词:
MRSA;
Staphylococcus aureus;
colonization;
microbial shifts;
porcine nasal microbiome;
BACTERIAL INTERFERENCE;
IDENTIFICATION;
ASSAY;
PCR;
2.
Antibiotics Shift the Temperature Response Curve of Escherichia coli Growth
作者:
Cruz-Loya Mauricio
;
Tekin Elif
;
Kang Tina ManzhuCardona NatalyaLozano-Huntelman NatalieRodriguez-Verdugo AlejandraSavage Van M.Yeh Pamela J.
期刊名称:
《msystems》
|
2021年第4期
关键词:
Escherichia coli;
antibiotic resistance;
antibiotics;
climate change;
environmental microbiology;
microbial ecology;
multiple stressors;
systems biology;
temperature;
thermal response;
CLIMATE-CHANGE;
HEAT-SHOCK;
DEPENDENCE;
RESISTANCE;
MODEL;
EVOLUTION;
TERRESTRIAL;
SENSITIVITY;
IMPACTS;
GENES;
3.
Assessing the Impact of Flavophospholipol and Virginiamycin Supplementation on the Broiler Microbiota: a Prospective Controlled Intervention Study
作者:
Mysara Mohamed
;
Berkell Matilda
;
Xavier Basil BrittoDe Backer SarahLammens ChristineHautekiet VeerlePetkov SpasGoossens HermanKumar-Singh SamirMalhotra-Kumar Surbhi
期刊名称:
《msystems》
|
2021年第4期
关键词:
flavomycin;
flavophospholipol;
virginiamycin;
broiler chicken;
microbiota;
16S rRNA sequencing;
INTESTINAL BACTERIAL COMMUNITY;
GROWTH PROMOTERS;
GUT MORPHOLOGY;
ANTIBIOTICS;
PERFORMANCE;
MICROFLORA;
FLAVOMYCIN;
RESISTANCE;
DATABASE;
ENZYMES;
4.
Ecological Adaptation and Succession of Human Fecal Microbial Communities in an Automated In Vitro Fermentation System
作者:
Gnanasekaran Thiyagarajan
;
Geraldo Juliana Assis
;
Ahrenkiel David WilczekAlvarez-Silva CamilaSaenz CarmenKhan AdnanHanteer ObaidaGunalan VithiagaranTrost KajetanMoritz ThomasArumugam Manimozhiyan
期刊名称:
《msystems》
|
2021年第4期
关键词:
fecal microbiota;
in vitro fermentor;
AKKERMANSIA-MUCINIPHILA;
GASTROINTESTINAL-TRACT;
KYNURENIC ACID;
GUT MICROBIOTA;
BUTYRATE;
BACTERIA;
IMPACT;
MUCIN;
COLON;
HOST;
5.
Host-Microbe Metagenomics: a Lens To Refocus Our Perspective on Infectious and Inflammatory Diseases
作者:
Kalantar Katrina L.
;
Langelier Charles R.
期刊名称:
《msystems》
|
2021年第4期
关键词:
DIAGNOSIS;
6.
Deciphering Metabolic Currencies That Support Marine Microbial Networks
作者:
Durham Bryndan P.
期刊名称:
《msystems》
|
2021年第4期
关键词:
cell signaling;
cell-cell interaction;
marinemicrobiology;
metabolic regulation;
metabolomics;
microbial networks;
phytoplankton;
sulfonates;
sulfurmetabolism;
PHYTOPLANKTON;
OCEAN;
SULFUR;
7.
Metabolomics in Functional Interrogation of Individual Holobiont Members
作者:
Garg Neha
期刊名称:
《msystems》
|
2021年第4期
关键词:
Symbiodiniaceae;
coral holobiont;
dark metabolome;
metabolomics;
microbiome;
MICROBIOME;
8.
Words Are Essential, but Underexamined, Research Tools for Microbes and Microbiomes
作者:
Szymanski Erika
期刊名称:
《msystems》
|
2021年第4期
关键词:
discourse;
engineering;
metaphor;
microbiome;
science and technology studies;
synthetic biology;
synthetic yeast;
SYNTHETIC BIOLOGY;
LANGUAGE;
9.
Dominant Bacterial Phyla from the Human Gut Show Widespread Ability To Transform and Conjugate Bile Acids
作者:
Lucas L. N.
;
Barrett K.
;
Kerby R. L.Zhang Q.Cattaneo L. E.Stevenson D.Rey F. E.Amador-Noguez D.
期刊名称:
《msystems》
|
2021年第4期
关键词:
bile acids;
gut bacteria;
microbially conjugated bile acids;
conjugation;
mass spectrometry;
microbiome;
CHOLIC-ACID;
CHENODEOXYCHOLIC ACID;
SALT HYDROLASE;
7-ALPHA-HYDROXYSTEROID DEHYDROGENASE;
7-BETA-HYDROXYSTEROID DEHYDROGENASE;
HYODEOXYCHOLIC ACID;
FECAL BACTERIA;
METABOLISM;
CHOLESTEROL;
MICROBIOTA;
10.
Catching SARS-CoV-2 by Sequence Hybridization: a Comparative Analysis
作者:
Rehn Alexandra
;
Braun Peter
;
Knuepfer MandyWoelfel RomanAntwerpen Markus H.Walter Mathias C.
期刊名称:
《msystems》
|
2021年第4期
关键词:
SARS-CoV-2;
mutations;
next-generation sequencing;
NGS;
enrichment;
ddPCR;
adaptive mutations;
sequence capture;
MUTATIONS;
11.
The Split Personality of Beauveria bassiana: Understanding the Molecular Basis of Fungal Parasitism and Mutualism
作者:
Ortiz-Urquiza Almudena
期刊名称:
《msystems》
|
2021年第4期
关键词:
Beauveria bassiana;
VOCs;
cuticular lipids;
endophytic growth;
fungal toxins;
lipid assimilation;
lipid hydrolysis;
plant-fungus association;
saprobe/parasite/mutualist continuum;
targeted gene knockout;
VIRULENCE;
CALEOSIN;
GROWTH;
12.
Two-Target Quantitative PCR To Predict Library Composition for Shallow Shotgun Sequencing
作者:
Cho Matthew Y.
;
Oliva Marc
;
Spreafico AnnaChen BoWei XuChoi YoojinKaul RupertSiu Lillian L.Coburn BryanSchneeberger Pierre H. H.
期刊名称:
《msystems》
|
2021年第4期
关键词:
shotgun sequencing;
shallow shotgun;
microbiome;
sample composition;
host DNA proportion;
metagenomics;
BACTERIAL LOAD;
13.
Teaching with Microbes: Lessons from Fermentation during a Pandemic
作者:
Carney Megan A.
期刊名称:
《msystems》
|
2021年第4期
关键词:
anthropology of food;
biopolitics;
fermentation;
human microbial relations;
microbiopolitics;
pandemic;
pedagogy;
social equity;
COVID-19;
14.
Ecology and Medicine Converge at the Microbiome-Host Interface
作者:
Harrington Valerie
;
Lau Lilian
;
Seddu KumbaSuez Jotham
期刊名称:
《msystems》
|
2021年第4期
关键词:
FMT;
microbiome;
antibiotic resistance;
microbial ecology;
postantibiotic effect;
probiotics;
GUT;
PROBIOTICS;
15.
Exploring Proteomes of Robust Yarrowia lipolytica Isolates Cultivated in Biomass Hydrolysate Reveals Key Processes Impacting Mixed Sugar Utilization, Lipid Accumulation, and Degradation
作者:
Walker Caleb
;
Dien Bruce
;
Giannone Richard J.Slininger PatriciaThompson Stephanie R.Trinh Cong T.
期刊名称:
《msystems》
|
2021年第4期
关键词:
bioreactor characterization;
proteomic analysis;
xylose metabolism;
xylose transporters;
lipid accumulation;
lipid degradation;
lipid regulators;
proteome;
robustness;
Yarrowia lipolytica;
OLEAGINOUS YEAST;
MALIC ENZYME;
TRANSCRIPTION;
REGULATOR;
PROTEIN;
GENES;
ACID;
STP1;
16.
Uncovering Divergence in Gene Expression Regulation in the Adaptation of Yeast to Nitrogen Scarcity
作者:
Villarroel Carlos A.
;
Bastias Macarena
;
Canessa PauloCubillos Francisco A.
期刊名称:
《msystems》
|
2021年第4期
关键词:
yeast;
allele-specific;
ATAC-seq;
nitrogen;
regulatory divergence;
wine;
fermentation;
gene regulation;
genetics;
natural variation;
SACCHAROMYCES-CEREVISIAE;
CIS;
WINE;
FERMENTATION;
MECHANISMS;
STARVATION;
EVOLUTION;
CHROMATIN;
ALIGNMENT;
GLUCOSE;
17.
Life Cycle Stage-Specific Accessibility of Leishmania donovani Chromatin at Transcription Start Regions
作者:
Gruenebast Janne
;
Lorenzen Stephan
;
Zummack JuliaClos Joachim
期刊名称:
《msystems》
|
2021年第4期
关键词:
nucleosomes;
micrococcal nuclease;
radicicol;
HSP90;
strand switch regions;
HEAT-SHOCK-PROTEIN;
EPIGENETIC REGULATION;
DIFFERENTIATION;
ORGANIZATION;
CHAPERONES;
EXPRESSION;
COMPACTION;
INITIATION;
18.
Recurrent Vulvovaginal Candidiasis: a Dynamic Interkingdom Biofilm Disease of Candida and Lactobacillus
作者:
McKloud Emily
;
Delaney Christopher
;
Sherry LeighannKean RyanWilliams ShaniceMetcalfe RebeccaThomas RachaelRichardson RiinaGerasimidis KonstantinosNile Christopher J.Williams CraigRamage Gordon
期刊名称:
《msystems》
|
2021年第4期
关键词:
antifungal resistance;
biofilm;
Candida;
clinical;
interkingdom;
Lactobacillus;
microbiome;
vulvovaginal candidiasis;
ALBICANS;
VAGINITIS;
PCR;
PATHOGENESIS;
PROBIOTICS;
GLABRATA;
WOMEN;
ACID;
19.
Characterizing Microbiomes via Sequencing of Marker Loci: Techniques To Improve Throughput, Account for Cross-Contamination, and Reduce Cost
作者:
Harrison Joshua G.
;
Randolph Gregory D.
;
Buerkle C. Alex
期刊名称:
《msystems》
|
2021年第4期
关键词:
microbiome;
high throughput;
next-generation sequencing;
spike in;
internal standard;
library preparation;
PCR;
automation;
multiplexing;
metabarcoding;
PEPTIDE NUCLEIC-ACID;
RIBOSOMAL-RNA;
DNA EXTRACTION;
COMMUNITY COMPOSITION;
PLANT;
PURIFICATION;
AMPLIFICATION;
ENRICHMENT;
NORMALIZATION;
PIPELINE;
20.
Abundance and Compositions of B-Vitamin-Producing Microbes in the Mammalian Gut Vary Based on Feeding Strategies
作者:
Alrubaye Hisham S.
;
Kohl Kevin D.
期刊名称:
《msystems》
|
2021年第4期
关键词:
gut microbiome;
vitamin biosynthesis;
WERNICKES ENCEPHALOPATHY;
THIAMINE-DEFICIENCY;
METABOLISM;
NUTRITION;
BACTERIA;
HOST;
BIFIDOBACTERIA;
CONVERGENCE;
EVOLUTION;
IMPACT;
21.
The Future of Virology is Synthetic
作者:
White Richard Allen III
期刊名称:
《msystems》
|
2021年第4期
关键词:
viruses;
bacteriophage (phage);
mycovirus;
multidrug-resistant microbes;
virosphere;
Hendrix product;
viral auxiliary metabolic genes (vAMGs);
massive parallel sequencing (MPS);
synthetic biology;
rules of life;
silent pandemic;
climate change;
engineering;
sustainable agriculture;
MARINE VIRUSES;
BACTERIOPHAGE;
RESISTANCE;
22.
Genome-Scale Metabolic Models and Machine Learning Reveal Genetic Determinants of Antibiotic Resistance in Escherichia coli and Unravel the Underlying Metabolic Adaptation Mechanisms
作者:
Pearcy Nicole
;
Hu Yue
;
Baker MichelleMaciel-Guerra AlexandreXue NingWang WeiKaler JasmeetPeng ZixinLi FengqinDottorini Tania
期刊名称:
《msystems》
|
2021年第4期
关键词:
antimicrobial resistance;
Escherichia coli;
genome-scale metabolic model;
machine learning;
GRAM-NEGATIVE BACTERIA;
PURINE METABOLISM;
OXIDATIVE DAMAGE;
MUTATIONS;
TOLERANCE;
STRAINS;
STRESS;
IRON;
TUBERCULOSIS;
PERSISTENCE;
23.
Population Genomics of emm4 Group A Streptococcus Reveals Progressive Replacement with a Hypervirulent Clone in North America
作者:
DebRoy Sruti
;
Sanson Misu
;
Shah BrittanyRegmi ShirjanaVega Luis AlbertoOdo ChiomaSahasrabhojane PranotiMcGeer AllisonTyrrell Gregory J.Fittipaldi NahuelShelburne Samuel A.Flores Anthony R.
期刊名称:
《msystems》
|
2021年第4期
关键词:
M type;
evolution;
exotoxin;
genomics;
group A Streptococcus;
population genetics;
virulence;
HYALURONIC-ACID CAPSULE;
VIRULENCE FACTOR;
UNITED-STATES;
M-PROTEIN;
INFECTION;
PHENOTYPE;
GENE;
EPIDEMICS;
IDENTIFICATION;
PATHOGENICITY;
24.
Separation of Donor and Recipient Microbial Diversity Allows Determination of Taxonomic and Functional Features of Gut Microbiota Restructuring following Fecal Transplantation
作者:
Olekhnovich Evgenii I
;
Ivanov Artem B.
;
Ulyantsev Vladimir IIlina Elena N.
期刊名称:
《msystems》
|
2021年第4期
关键词:
gut microbiota;
fecal transplantation;
antibiotic resistance;
colonization resistance;
fecal microbiota transplantation;
metagenomics;
RESISTANCE;
COLONIZATION;
ENGRAFTMENT;
COMPETITION;
REVEALS;
GENOMES;
HOST;
25.
Adenovirus Remodeling of the Host Proteome and Host Factors Associated with Viral Genomes
作者:
Dybas Joseph M.
;
Lum Krystal K.
;
Kulej KatarzynaReyes Emigdio D.Lauman RichardCharman MatthewPurman Caitlin E.Steinbock Robert T.Grams NicholasPrice Alexander M.Mendoza LydiaGarcia Benjamin A.Weitzman Matthew D.
期刊名称:
《msystems》
|
2021年第4期
关键词:
adenovirus;
ubiquitin;
protein-DNA binding;
mass spectrometry;
proteomics;
iPOND;
virus-host interactions;
PROTEASOME-DEPENDENT DEGRADATION;
HUMAN RECQ HELICASES;
LATE GENE-EXPRESSION;
EARLY REGION-4;
REPLICATION FORKS;
E1B55K PROTEINS;
SMC5/6 COMPLEX;
MRN COMPLEX;
DNA-REPAIR;
CHROMATIN;
26.
The LysR-Type Transcriptional Regulator BsrA (PA2121) Controls Vital Metabolic Pathways in Pseudomonas aeruginosa
作者:
Modrzejewska Magdalena
;
Kawalek Adam
;
Bartosik Aneta Agnieszka
期刊名称:
《msystems》
|
2021年第4期
关键词:
Pseudomonas aeruginosa;
LysR-type transcriptional regulator;
LTTR;
BsrA regulon;
tricarboxylic acid cycle;
regulatory network;
MULTIDRUG EFFLUX SYSTEM;
CITRIC-ACID CYCLE;
MEXE-MEXF-OPRN;
CYSTIC-FIBROSIS;
DNA-BINDING;
DEPENDENT REGULATION;
REGIONS IMPORTANT;
GLOBAL REGULATOR;
QUINOLONE SIGNAL;
GENE;
27.
The Secret Life of Giant Viruses in the California Current
作者:
Abrahao Jonatas Santos
期刊名称:
《msystems》
|
2021年第4期
关键词:
Nucleocytoviricota;
Varidnaviria;
giant virus;
oceans;
protists;
transcriptomics;
28.
The Future of (Soil) Microbiome Studies: Current Limitations, Integration, and Perspectives
作者:
Geisen Stefan
期刊名称:
《msystems》
|
2021年第4期
关键词:
microbiome;
food webs;
protists;
soil microbiology;
trophic interactions;
29.
Portable and Rapid Sequencing Device with Microbial Community-Guided Culture Strategies for Precious Field and Environmental Samples
作者:
Ho Ying-Ning
;
Chen Yu-Ling
;
Liu Ding-Yang
期刊名称:
《msystems》
|
2021年第4期
关键词:
cultivation;
functional metagenomics;
uncultured microbes;
culture;
medium prediction;
portable and rapid sequencing device;
DNA sequencing;
bioinformatics;
environmental microbiology;
MICROORGANISMS;
CULTIVATION;
30.
Serine Metabolism Tunes Immune Responses To Promote Oreochromis niloticus Survival upon Edwardsiella tarda Infection
作者:
Yang Dai-Xiao
;
Yang Man-Jun
;
Yin YueKou Tian-ShunPeng Liao-TianChen Zhuang-GuiZheng JunPeng Bo
期刊名称:
《msystems》
|
2021年第4期
关键词:
glutathione;
metabolomics;
overactive immune response;
reactive oxygen species;
serine;
VIBRIO-ALGINOLYTICUS INFECTION;
METABOLOMICS;
VALIDATION;
ZEBRAFISH;
ANIMALS;
TILAPIA;
IMPACT;
CELLS;
FISH;
PCR;
31.
Chemical Gradients of Plant Substrates in an Atta texana Fungus Garden
作者:
Caraballo-Rodriguez Andres Mauricio
;
Puckett Sara P.
;
Kyle Kathleen E.Petras Danielda Silva RicardoNothias Louis-FelixErnst Madeleinevan der Hooft Justin J. J.Tripathi AnupriyaWang MingxunBalunas Marcy J.Klassen Jonathan L.Dorrestein Pieter C.
期刊名称:
《msystems》
|
2021年第4期
关键词:
ant fungus garden;
Atta texana;
chemical transformation;
fungal symbiont;
metabolomics;
molecular cartography;
mass spectrometry;
LEAF-CUTTING ANTS;
PEPTIDIC NATURAL-PRODUCTS;
DATABASE SEARCH;
ENZYMES;
BIOMASS;
DEGRADATION;
COMMUNITY;
CULTIVAR;
IMPACT;
32.
Cell Growth Model with Stochastic Gene Expression Helps Understand the Growth Advantage of Metabolic Exchange and Auxotrophy
作者:
Dutta Dibyendu
;
Saini Supreet
期刊名称:
《msystems》
|
2021年第4期
关键词:
cross-feeding;
mutualism;
cooperation;
microbial communities;
stochastic growth model;
metabolite exchange;
Adder;
Sizer;
gene expression noise;
division of labor;
resource allocation;
CROSS-FEEDING INTERACTIONS;
MICROBIAL COMMUNITIES;
SIZE;
REPLICATION;
DIVISION;
COOPERATION;
MECHANISMS;
HOMEOSTASIS;
STABILITY;
EVOLUTION;
33.
The Future of Bacteriophage Therapy Will Promote Antimicrobial Susceptibility
作者:
Barber Olivia Williams
;
Miramontes Iria Manas
;
Jain ManuOzer A. EgonHartmann M. Erica
期刊名称:
《msystems》
|
2021年第4期
关键词:
Pseudomonas aeruginosa;
antibiotic resistance;
bacteriophage therapy;
evolutionary rescue;
ESCHERICHIA-COLI O157-H7;
CELL-SURFACE RECEPTOR;
PSEUDOMONAS-AERUGINOSA;
EVOLUTIONARY RESCUE;
PHAGE THERAPY;
EFFLUX PUMPS;
RESISTANCE MECHANISMS;
ANTIBIOTIC-RESISTANCE;
BIOFILMS;
PROTEIN;
34.
RNA-Protein Interaction Analysis of SARS-CoV-2 5 ' and 3 ' Untranslated Regions Reveals a Role of Lysosome-Associated Membrane Protein-2a during Viral Infection
作者:
Verma Rohit
;
Saha Sandhini
;
Kumar ShivMani ShailendraMaiti Tushar KantiSurjit Milan
期刊名称:
《msystems》
|
2021年第4期
关键词:
SARS-CoV-2;
5' UTR;
3' UTR;
RNA-protein interaction network;
coronavirus;
virus-host interaction;
Lamp2;
Lamp2a;
MOUSE HEPATITIS-VIRUS;
RIBONUCLEOPROTEIN A1 BINDS;
CORONAVIRUS;
DISCOVERY;
EXPRESSION;
GENOME;
GENE;
TRANSCRIPTION;
REPLICATION;
COMPLEX;
35.
The Resistome and Mobilome of Multidrug-Resistant Staphylococcus sciuri C2865 Unveil a Transferable Trimethoprim Resistance Gene, Designated dfrE, Spread Unnoticed
作者:
Gomez-Sanz Elena
;
Manuel Haro-Moreno Jose
;
Jensen Slade O.Roda-Garcia Juan J.Lopez-Perez Mario
期刊名称:
《msystems》
|
2021年第4期
关键词:
Staphylococcus sciuri;
adaptation;
comparative genomics;
dfrE;
dihydrofolate reductase;
methicillin-resistant coagulase-negative staphylococci;
mobile genetic elements;
multidrug resistance;
plasmid;
trimethoprim;
SCCmec;
prophage;
PICI;
S. sciuri subspecies;
intraspecies diversity;
evolution;
reservoir;
CASSETTE CHROMOSOME MEC;
DIHYDROFOLATE-REDUCTASE;
MOLECULAR CHARACTERIZATION;
ANTIMICROBIAL-RESISTANCE;
AUREUS ST398;
SP NOV.;
IDENTIFICATION;
PLASMID;
STRAINS;
PHAGE;
36.
A Combination of Metagenomic and Cultivation Approaches Reveals Hypermutator Phenotypes within Vibrio cholerae-Infected Patients
作者:
Levade Ines
;
Khan Ashraful I
;
Chowdhury FahimaCalderwood Stephen B.Ryan Edward T.Harris Jason B.LaRocque Regina C.Bhuiyan Taufiqur R.Qadri FirdausiWeil Ana A.Shapiro B. Jesse
期刊名称:
《msystems》
|
2021年第4期
关键词:
Vibrio cholerae;
cholera;
metagenomics;
within-patient evolution;
hypermutation;
asymptomatic carriage;
convergent evolution;
genomics;
intrahost diversity;
natural selection;
population genetics;
ADAPTIVE EVOLUTION;
ESCHERICHIA-COLI;
CYSTIC-FIBROSIS;
TRANSMISSION;
REPAIR;
HOST;
ALGORITHM;
PATHOGEN;
INSIGHTS;
MUTATION;
37.
Pathogenic Vibrio Species Are Associated with Distinct Environmental Niches and Planktonic Taxa in Southern California (USA) Aquatic Microbiomes
作者:
Diner Rachel E.
;
Kaul Drishti
;
Rabines ArielZheng HongSteele Joshua A.Griffith John F.Allen Andrew E.
期刊名称:
《msystems》
|
2021年第4期
关键词:
amplicon sequence variants;
chitin;
diatom;
metabarcoding;
metagenomics;
rRNA;
vibrio;
REAL-TIME PCR;
COPEPOD PSEUDODIAPTOMUS-INOPINUS;
ANTIBIOTIC-RESISTANCE;
VULNIFICUS STRAINS;
INFECTIOUS-DISEASE;
SECRETION SYSTEM;
GLOBAL CLIMATE;
CHOLERAE;
PARAHAEMOLYTICUS;
GENE;
38.
Metagenome-Wide Analysis of Rural and Urban Surface Waters and Sediments in Bangladesh Identifies Human Waste as a Driver of Antibiotic Resistance
作者:
McInnes Ross Stuart
;
Uz-Zaman Md Hassan
;
Alam Imam TaskinHo Siu Fung StanleyMoran Robert A.Clemens John D.Islam Md Sirajulvan Schaik Willem
期刊名称:
《msystems》
|
2021年第4期
关键词:
resistome;
metagenome;
antibiotic resistance;
plasmids;
aquaculture;
Bangladesh;
antimicrobial resistance;
environmental microbiology;
public health;
sediment;
surface water;
HEAVY-METALS;
SEQUENCE;
OVEREXPRESSION;
AQUACULTURE;
MANAGEMENT;
BURIGANGA;
RIVER;
39.
Gut Microbiome Structure and Association with Host Factors in a Korean Population
作者:
Lim Mi Young
;
Hong Seungpyo
;
Bang So-JungChung Won-HyongShin Ji-HeeKim Jung-HaNam Young-Do
期刊名称:
《msystems》
|
2021年第4期
关键词:
dietary pattern;
enterotype;
gut microbiome;
host factor;
host-microbiome;
microbial cluster;
ENTEROTYPES;
DIVERSITY;
PATTERNS;
40.
Towards the Characterization and Engineering of Bacteriophages in the Gut Microbiome COMMENT
作者:
Hsu Bryan B.
期刊名称:
《msystems》
|
2021年第4期
关键词:
phage;
synthetic biology;
gut microbiome;
BACTERIA;
41.
Comparative Genomics Reveals a Remarkable Biosynthetic Potential of the Streptomyces Phylogenetic Lineage Associated with Rugose-Ornamented Spores
作者:
Chung Yoon-Hee
;
Kim Hiyoung
;
Ji Chang-HunJe Hyun-WooLee DonghoShim Sang HeeJoo Hwang-SooKang Hahk-Soo
期刊名称:
《msystems》
|
2021年第4期
关键词:
comparative genomics;
genome mining;
secondary metabolites;
biosynthetic gene clusters;
GENE CLUSTERS;
VIOLACEUSNIGER CLADE;
DISCOVERY;
IDENTIFICATION;
ANTIBIOTICS;
ACTIVATION;
SOFTWARE;
INSIGHTS;
TOOL;
42.
Soil Candidate Phyla Radiation Bacteria Encode Components of Aerobic Metabolism and Co-occur with Nanoarchaea in the Rare Biosphere of Rhizosphere Grassland Communities
作者:
Nicolas Alexa M.
;
Jaffe Alexander L.
;
Nuccio Erin E.Taga Michiko E.Firestone Mary K.Banfield Jillian F.
期刊名称:
《msystems》
|
2021年第4期
关键词:
CPR;
DPANN;
archaea;
bacteria;
environmental microbiology;
metagenomics;
soil;
soil microbiology;
symbiosis;
43.
Comprehensive Strain-Level Analysis of the Gut Microbe Faecalibacterium prausnitzii in Patients with Liver Cirrhosis
作者:
Chen Yaowen
;
Liu Pu
;
Liu RunyanHu ShuofengHe ZhenDong GuohuaFeng ChaoAn SijingYing Xiaomin
期刊名称:
《msystems》
|
2021年第4期
关键词:
liver cirrhosis;
Faecalibacterium prausnitzii;
within-species variation;
species heterogeneity;
strain diversity;
strain-level analysis;
single-nucleotide polymorphisms;
gut microbiome;
human metagenomics;
ALIGNMENT;
GENE;
TOOL;
44.
Comprehensive Wet-Bench and Bioinformatics Workflow for Complex Microbiota Using Oxford Nanopore Technologies
作者:
Ammer-Herrmenau Christoph
;
Pfisterer Nina
;
van den Berg TimGavrilova IvanaAmanzada AhmadSingh Shiv K.Khalil AlaaAlili RohiaBelda EugeniClement KarineEl Wahed Ahmed AbdGady ElSagad EltayebHaubrock MartinBeissbarth TimEllenrieder VolkerNeesse Albrecht
期刊名称:
《msystems》
|
2021年第4期
关键词:
16S rRNA;
bioinformatic workflow;
buccal swab;
DNA extraction;
eNAT;
eSwab;
Kaiju;
Kraken2;
metagenomics;
MetaMaps;
Metapont;
microbiome;
Oxford Nanopore Technologies;
ONT;
rectal swab;
sampling;
sequencing;
storage;
GUT MICROBIOME;
ASSOCIATION;
DIVERSITY;
MUCOSAL;
STORAGE;
GENOME;
SWAB;
45.
Phage Diversity in the Human Gut Microbiome: a Taxonomist's Perspective
作者:
Adriaenssens Evelien M.
期刊名称:
《msystems》
|
2021年第4期
关键词:
human gut virome;
microbiome;
phage taxonomy;
phageome;
virome;
ICTV BACTERIAL;
UPDATE;
46.
Comparative Genomics Reveals Thermal Adaptation and a High Metabolic Diversity in 'Candidatus Bathyarchaeia'
作者:
Qi Yan-Ling
;
Evans Paul N.
;
Li Yu-XianRao Yang-ZhiQu Yan-NiTan ShaJiao Jian-YuChen Ya-TingHedlund Brian P.Shu Wen-ShengHua Zheng-ShuangLi Wen-Jun
期刊名称:
《msystems》
|
2021年第4期
关键词:
Ca. Bathyarchaeia;
polysaccharide degradation;
alkane metabolism;
thermal adaptation;
horizontal gene transfer;
MISCELLANEOUS CRENARCHAEOTAL GROUP;
MULTIPLE SEQUENCE ALIGNMENT;
ARCHAEA;
SEDIMENTS;
DATABASE;
ANNOTATION;
PERSPECTIVES;
PROKARYOTES;
METAGENOME;
ALGORITHM;
47.
Embracing Metagenomic Complexity with a Genome-Free Approach
作者:
Coleman Izaak
;
Korem Tal
期刊名称:
《msystems》
|
2021年第4期
关键词:
assembly;
genomics;
metagenomics;
microbiome;
SINGLE-CELL;
ALGORITHM;
48.
Dysbiosis of the Urinary Bladder Microbiome in Cats with Chronic Kidney Disease
作者:
Kim Younjung
;
Carrai Maura
;
Leung Marcus H. Y.Chin JaimeLi JunLee Patrick K. H.Beatty Julia A.Pfeiffer Dirk U.Barrs Vanessa R.
期刊名称:
《msystems》
|
2021年第4期
关键词:
Escherichia coli;
microbiome;
urinary tract infection;
veterinary microbiology;
TRACT;
PREVALENCE;
WOMEN;
49.
Refined Quantification of Infection Bottlenecks and Pathogen Dissemination with STAMPR
作者:
Hullahalli Karthik
;
Pritchard Justin R.
;
Waldor Matthew K.
期刊名称:
《msystems》
|
2021年第4期
关键词:
barcodes;
bottlenecks;
population dynamics;
STREPTOCOCCUS-PNEUMONIAE;
POPULATION;
SELECTION;
DYNAMICS;
50.
Multilevel Genome Typing Describes Short- and Long-Term Vibrio cholerae Molecular Epidemiology
作者:
Cheney Liam
;
Payne Michael
;
Kaur SandeepLan Ruiting
期刊名称:
《msystems》
|
2021年第4期
关键词:
classification;
epidemiology;
multilevel genome typing;
outbreak;
phylogenetic relationships;
seventh pandemic;
standardization;
transmission;
typing;
Vibrio cholerae;
O1;
EMERGENCE;
KOLKATA;
STRAINS;
HAITI;
51.
Ecology and Function of the Transmissible Locus of Stress Tolerance in Escherichia coli and Plant-Associated Enterobacteriaceae
作者:
Wang Zhiying
;
Hu Huifeng
;
Zhu TongboZheng JinshuiGanzle Michael G.Simpson David J.
期刊名称:
《msystems》
|
2021年第4期
关键词:
transmissible locus of stress tolerance;
LHR;
Enterobacteriaceae;
antimicrobial resistance;
Klebsiella pneumoniae;
Cronobacter sakazakii;
chlorine resistance;
heat resistance;
locus of heat resistance;
KLEBSIELLA-PNEUMONIAE;
FOREST SOIL;
RESISTANCE;
COLONIZATION;
STRAINS;
CLOACAE;
52.
Retooling Microbiome Engineering for a Sustainable Future
作者:
Lawson Christopher E.
期刊名称:
《msystems》
|
2021年第4期
关键词:
automation;
machine learning;
microbiome engineering;
synthetic biology;
systems biology;
53.
Giant Virus-Eukaryote Interactions as Ecological and Evolutionary Driving Forces
作者:
Ku Chuan
期刊名称:
《msystems》
|
2021年第4期
关键词:
gene content;
microalga;
Nucleocytoviricota;
protist;
virus-host interactions;
HOST;
POXVIRUSES;
54.
Multi-omic Characterization of Intraspecies Variation in Laboratory and Natural Environments
作者:
Behringer Megan G.
期刊名称:
《msystems》
|
2021年第4期
关键词:
ecotypic variation;
experimental evolution;
population genomics;
systems biology;
metagenomics;
systems microbiology;
EVOLUTION;
POPULATION;
DYNAMICS;
55.
Role of the Discriminator Sequence in the Supercoiling Sensitivity of Bacterial Promoters
作者:
Forquet Raphael
;
Pineau Maiwenn
;
Nasser WilliamReverchon SylvieMeyer Sam
期刊名称:
《msystems》
|
2021年第4期
关键词:
DNA supercoiling;
transcriptional regulation;
quantitative modeling;
discriminator;
stress response;
evolution;
biophysics;
computational biology;
ESCHERICHIA-COLI;
TRANSCRIPTIONAL REGULATION;
SALMONELLA-TYPHIMURIUM;
DNA;
EXPRESSION;
EVOLUTION;
GENE;
FIS;
MODULATION;
INITIATION;
56.
Metabolic Differentiation of Co-occurring Accumulibacter Clades Revealed through Genome-Resolved Metatranscriptomics
作者:
McDaniel Elizabeth A.
;
Moya-Flores Francisco
;
Beach Natalie KeeneCamejo Pamela Y.Oyserman Ben O.Kizaric MatthewKhor Eng HoeNoguera Daniel R.McMahon Katherine D.
期刊名称:
《msystems》
|
2021年第4期
关键词:
EBPR;
environmental microbiology;
genomics;
metagenomics;
metatranscriptomics;
BIOLOGICAL PHOSPHORUS REMOVAL;
CANDIDATUS-ACCUMULIBACTER;
POLYPHOSPHATE KINASE;
POPULATION-STRUCTURE;
PHOSPHATIS CLADES;
GENE-EXPRESSION;
DIVERSITY;
RECONSTRUCTION;
VISUALIZATION;
MICROBIOLOGY;
57.
Machine Learning Prediction of Resistance to Subinhibitory Antimicrobial Concentrations from Escherichia coli Genomes
作者:
Benkwitz-Bedford Sam
;
Palm Martin
;
Demirtas Talip YasirMustonen VilleFarewell AnneWarringer JonasParts LeopoldMoradigaravand Danesh
期刊名称:
《msystems》
|
2021年第4期
关键词:
antimicrobial resistance;
deep learning;
high-throughput assay;
machine learning;
whole-genome sequencing;
ANTIBIOTIC-RESISTANCE;
SELECTION;
EVOLUTION;
SEQUENCE;
ACID;
58.
Hidden Treasures: Microbial Natural Product Biosynthesis off the Beaten Path
作者:
Biermann Friederike
;
Helfrich Eric J. N.
期刊名称:
《msystems》
|
2021年第4期
关键词:
bioinformatics;
biosynthesis;
biosynthetic gene cluster;
genome mining;
natural products;
peptides;
polyketides;
terpenes;
GENE CLUSTERS;
BACTERIAL;
PEPTIDE;
59.
Bacterial Epigenomics: Coming of Age COMMENT
作者:
Oliveira Pedro H.
期刊名称:
《msystems》
|
2021年第4期
关键词:
methylation;
metaepigenomics;
holoepigenomics;
antimicrobial;
single cell;
epigenetics;
RESTRICTION-MODIFICATION SYSTEMS;
DNA METHYLATION;
60.
Forming Consensus To Advance Urobiome Research
作者:
Brubaker Linda
;
Gourdine Jean-Philippe F.
;
Siddiqui Nazema Y.Holland AmandaHalverson ThomasLimeria RobertoPride DavidAckerman LenoreForster Catherine S.Jacobs Kristin M.Thomas-White Krystal J.Putonti CatherineDong QunfengWeinstein MichaelLukacz Emily S.Karstens LisaWolfe Alan J.
期刊名称:
《msystems》
|
2021年第4期
关键词:
consensus;
guideline;
human microbiome;
research;
statement;
urinary microbiome;
urobiome;
URINE;
METAGENOMICS;
STATEMENT;
STANDARD;
61.
Direct Regulons of AtxA, the Master Virulence Regulator of Bacillus anthracis
作者:
Furuta Yoshikazu
;
Cheng Cheng
;
Zorigt TuvshinzayaPaudel AtmikaIzumi ShunTsujinouchi MaiShimizu TomokoMeijer Wim G.Higashi Hideaki
期刊名称:
《msystems》
|
2021年第4期
关键词:
Bacillus anthracis;
Cappable-seq;
ChIP-seq;
DNA-binding proteins;
small RNA;
transcription factors;
transcriptional regulation;
virulence factors;
DIFFERENTIAL EXPRESSION ANALYSIS;
DNA-BINDING SPECIFICITY;
PROTECTIVE ANTIGEN GENE;
CAPSULE SYNTHESIS;
READ ALIGNMENT;
TRANSCRIPTION;
SEQUENCE;
TRANSACTIVATOR;
GERMINATION;
PLASMIDS;
62.
Genome-Scale Analysis of Acetobacterium woodii Identifies Translational Regulation of Acetogenesis
作者:
Shin Jongoh
;
Song Yoseb
;
Kang SeulgiJin SangrakLee Jung-KulKim Dong RipCho SuhyungMueller VolkerCho Byung-Kwan
期刊名称:
《msystems》
|
2021年第4期
关键词:
acetogen;
acetogenesis;
translational regulation;
Wood-Ljungdahl pathway;
CLOSTRIDIUM-LJUNGDAHLII;
COMMODITY CHEMICALS;
INITIATION;
MODEL;
METABOLISM;
ENERGETICS;
REDUCTASE;
INSIGHTS;
GROWTH;
63.
Contribution of N-epsilon-lysine Acetylation towards Regulation of Bacterial Pathogenesis
作者:
Luu Jackson
;
Carabetta Valerie J.
期刊名称:
《msystems》
|
2021年第4期
关键词:
posttranslational modification;
acetylation;
acetylome;
virulence;
pathogens;
biofilm;
antibiotic resistance;
bacteria;
MYCOBACTERIUM-TUBERCULOSIS;
RESPONSE REGULATOR;
PSEUDOMONAS-AERUGINOSA;
COMPREHENSIVE ANALYSIS;
SYSTEMATIC ANALYSIS;
VIRULENCE FACTORS;
ANALYSIS REVEALS;
DNA-BINDING;
PROTEIN;
ACETYLOME;
64.
Facial Skin Microbiota-Mediated Host Response to Pollution Stress Revealed by Microbiome Networks of Individual
作者:
Wang Lu
;
Xu Yi-Ning
;
Chu Chung-ChingJing ZehuaChen YabinZhang JinsongPu MingmingMi TingyanDu YapingLiang ZongqiDoraiswamy ChandraprabhaZeng TaoWu JiaruiChen Luonan
期刊名称:
《msystems》
|
2021年第4期
关键词:
skin microbiome;
direct association;
pollution;
single-sample network;
microbiome network of individual;
microbiome network of population;
CUTANEOUS BACTERIA;
DEGRADATION;
PROTEASES;
EXPOSURE;
65.
Comparative Genomics of Exiguobacterium Reveals What Makes a Cosmopolitan Bacterium
作者:
Zhang Dechao
;
Zhu Zhaolu
;
Li YangjieLi XudongGuan ZiyuZheng Jinshui
期刊名称:
《msystems》
|
2021年第4期
关键词:
Exiguobacterium;
cosmopolitan distribution;
genomics;
adaptation strategies;
polysaccharide utilization;
transporters;
HEAT-SHOCK PROTEINS;
FRESH-WATER;
MARINE;
GENUS;
SEQUENCE;
IDENTIFICATION;
DEGRADATION;
TRANSPORTER;
BIOSYNTHESIS;
EVOLUTIONARY;
66.
A Combinatorial Approach of High-Throughput Genomics and Mass Proteomics for Understanding the Regulation and Expression of Secondary Metabolite Production in Actinobacteria
作者:
Gupta Vipin
;
Singhvi Nirjara
期刊名称:
《msystems》
|
2021年第4期
关键词:
combinatorial biosynthesis;
proteomics;
Actinobacteria;
secondary metabolite;
GENE CLUSTERS;
BIOSYNTHESIS;
EVOLUTION;
BACTERIAL;
PREDICTION;
PKS;
67.
Identification and Quantification of Bovine Digital Dermatitis-Associated Microbiota across Lesion Stages in Feedlot Beef Cattle
作者:
Caddey Ben
;
Orsel Karin
;
Naushad SohailDerakhshani HoomanDe Buck Jeroen
期刊名称:
《msystems》
|
2021年第4期
关键词:
digital dermatitis;
bovine;
beef cattle;
feedlot;
Treponema;
hoof;
skin microbiota;
microbiome;
16S metagenomics;
DAIRY-CATTLE;
FUSOBACTERIUM-NECROPHORUM;
CALIFORNIA DAIRY;
PREVALENCE;
PERFORMANCE;
DYNAMICS;
DATABASE;
COWS;
68.
Comprehensive Cultivation of the Swine Gut Microbiome Reveals High Bacterial Diversity and Guides Bacterial Isolation in Pigs
作者:
Wang Xiaofan
;
Howe Samantha
;
Wei XiaoyuanDeng FeilongTsai TsungchengChai JianminXiao YingpingYang HuaMaxwell Charles VLi YingZhao Jiangchao
期刊名称:
《msystems》
|
2021年第4期
关键词:
swine gut microbiome;
diversity;
culturability;
culturomics;
novel strain;
SP-NOV.;
CULTURE;
NETWORKS;
GENOME;
DIET;
69.
Emergence of Caenorhabditis elegans as a Model Organism for Dissecting the Gut-Brain Axis
作者:
de Ora Lizett Ortiz
;
Bess Elizabeth N.
期刊名称:
《msystems》
|
2021年第4期
关键词:
C. elegans;
gut microbiome;
gut-brain axis;
gnotobiotics;
neurosignals;
neurodegenerative diseases;
MICROBIOTA;
70.
Evolving Interactions and Emergent Functions in Microbial Consortia
作者:
Rodriguez-Verdugo Alejandra
期刊名称:
《msystems》
|
2021年第4期
关键词:
evolution;
microbial ecology;
environmental change;
species interactions;
microbial communities;
ecosystem functions;
collective metabolism;
METABOLIC INTERACTIONS;
EVOLUTION;
COMMUNITIES;
71.
Developing Functional Genomics Platforms for Fungi COMMENT
作者:
Huberman Lori B.
期刊名称:
《msystems》
|
2021年第4期
关键词:
functional genomics;
fungi;
transcriptional profiling;
72.
Microbiota Perturbation or Elimination Can Inhibit Normal Development and Elicit a Starvation-Like Response in an Omnivorous Model Invertebrate
作者:
De Leon Arturo Vera-Ponce
;
Jahnes Benjamin C.
;
Otero-Bravo AlejandroSabree Zakee L.
期刊名称:
《msystems》
|
2021年第4期
关键词:
Periplaneta americana;
germfree;
gnotobiotic;
microbiome;
GUT MICROBIOTA;
METABOLISM;
DROSOPHILA;
HIPPO;
COCKROACH;
TOR;
EVOLUTIONARY;
PLATFORM;
GROWTH;
73.
Microbiome Management for the 21st Century and Beyond
作者:
Hryckowian Andrew J.
期刊名称:
《msystems》
|
2021年第4期
关键词:
antibiotic resistance;
bacterial pathogens;
bacteriophages;
dietary fiber;
microbiome;
GUT MICROBIOTA;
DIET;
74.
Linking 16S rRNA Gene Classification to amoA Gene Taxonomy Reveals Environmental Distribution of Ammonia-Oxidizing Archaeal Clades in Peatland Soils
作者:
Wang Haitao
;
Bagnoud Alexandre
;
Ponce-Toledo Rafael IKerou MelinaWeil MichaSchleper ChristaUrich Tim
期刊名称:
《msystems》
|
2021年第4期
关键词:
amoA gene taxonomy;
phylogenetic congruence;
AOA clades;
peatland soils;
16S rRNA gene;
MULTIPLE SEQUENCE ALIGNMENT;
MESOPHILIC CRENARCHAEOTA;
MICROBIAL COMMUNITIES;
NITRIFICATION RATES;
BACTERIA;
ABUNDANCE;
DIVERSITY;
CULTIVATION;
POPULATIONS;
PERFORMANCE;
75.
How the Physical Environment Shapes the Microbiota
作者:
Tropini Carolina
期刊名称:
《msystems》
|
2021年第4期
关键词:
gut biogeography;
microbiota;
physical perturbations;
INFLAMMATION;
76.
The Tempo and Mode of Adaptation in a Complex Natural Population: the Microbiome
作者:
Garud Nandita
期刊名称:
《msystems》
|
2021年第4期
关键词:
GUT MICROBIOTA;
SOFT SWEEPS;
EVOLUTION;
GENETICS;
RESISTANCE;
DYNAMICS;
77.
Ultra-resolution Metagenomics: When Enough Is Not Enough
作者:
Hildebrand Falk
期刊名称:
《msystems》
|
2021年第4期
关键词:
metagenomics;
sequencing technology;
microbiology;
microbial evolution;
EVOLUTION;
GENOMES;
GENES;
RARE;
78.
Cross-Scale Analyses of Animal and Human Gut Microbiome Assemblies from Metacommunity to Global Landscape
作者:
Ma Zhanshan (Sam)
期刊名称:
《msystems》
|
2021年第4期
关键词:
animal gut microbiome;
human gut microbiome;
microbiome-host coadaptation;
unified neutral theory of biodiversity;
multisite neutral model;
power analysis;
ABUNDANCE DISTRIBUTIONS;
NEUTRAL PROCESSES;
NICHE;
DIVERSITY;
COMMUNITIES;
EVOLUTION;
ROLES;
79.
Leveraging Immunopeptidomics To Study and Combat Infectious Disease
作者:
Leddy Owen K.
;
White Forest M.
;
Bryson Bryan D.
期刊名称:
《msystems》
|
2021年第4期
关键词:
host-pathogen interactions;
immunology;
immunopeptidomics;
infectious disease;
mass spectrometry;
proteomics;
vaccines;
MHC CLASS-I;
CD8(+) T-CELLS;
ANTIGEN PRESENTATION;
MASS-SPECTROMETRY;
IMMUNE-RESPONSES;
HLA;
PEPTIDES;
TUBERCULOSIS;
PLASMODIUM;
DISCOVERY;
80.
Ecogenomics and Adaptation Strategies of Southern Ocean Viral Communities
作者:
Alarcon-Schumacher Tomas
;
Guajardo-Leiva Sergio
;
Martinez-Garcia ManuelDiez Beatriz
期刊名称:
《msystems》
|
2021年第4期
关键词:
viral diversity;
Southern Ocean;
molecular and physiological adaptations;
stress adaptation;
COLD-ADAPTATION;
CRYSTAL-STRUCTURE;
PROTEIN FUNCTION;
MOLECULAR-BASIS;
ALPHA-AMYLASE;
VIRUSES;
DIVERSITY;
SUMMER;
BACTERIOPLANKTON;
STABILITY;
81.
Metabolic Features of Ganjang (a Korean Traditional Soy Sauce) Fermentation Revealed by Genome-Centered Metatranscriptomics
作者:
Chun Byung Hee
;
Han Dong Min
;
Kim Hyung MinPark DongbinJeong Da MinKang Hyun AhJeon Che Ok
期刊名称:
《msystems》
|
2021年第4期
关键词:
metagenome;
fermentation;
ganjang;
genome centered;
metabolic pathway;
metatranscriptome;
soy sauce;
MICROBIAL COMMUNITY;
MICROORGANISMS;
DYNAMICS;
82.
High Transcriptional Activity and Diverse Functional Repertoires of Hundreds of Giant Viruses in a Coastal Marine System
作者:
Ha Anh D.
;
Moniruzzaman Mohammad
;
Aylward Frank O.
期刊名称:
《msystems》
|
2021年第4期
关键词:
giant viruses;
NCLDV;
Nucleocytoviricota;
viral diversity;
kinesin;
myosin;
cytoskeleton;
GENOME SEQUENCE;
GENE-TRANSFER;
GREEN-ALGAE;
DNA VIRUSES;
HOST;
PHYTOPLANKTON;
EVOLUTION;
PROTEIN;
TREE;
83.
Quantifying Microbial Activity In Situ: the Link between Cells and Cycles
作者:
Dekas Anne E.
期刊名称:
《msystems》
|
2021年第4期
关键词:
microbial activity;
biogeochemical cycling;
deep sea;
stable isotope probing;
nanoSIMS;
single cell;
nitrogen fixation;
ANME archaea;
Thaumarchaeota;
fungal shunt;
microbial interactions;
FISH;
FIXATION;
SEDIMENT;
NITROGEN;
84.
Horizontal Gene Transfer Is the Main Driver of Antimicrobial Resistance in Broiler Chicks Infected with Salmonella enterica Serovar Heidelberg
作者:
Oladeinde Adelumola
;
Abdo Zaid
;
Press Maximilian O.Cook KimberlyCox Nelson A.Zwirzitz BenjaminWoyda ReedLakin Steven M.Thomas Jesse C.Looft ToreyCosby Douglas E.Hinton Arthur Jr.Guard JeanLine EricRothrock Michael J.Berrang Mark E.Herrington KylerZock GregoryLawrence Jodie PlumbleeCudnik DeniceHouse SandraIngram KimberlyLariscy LeahWagner MartinAggrey Samuel E.Chai LilongRitz Casey
期刊名称:
《msystems》
|
2021年第4期
关键词:
antimicrobial resistance;
horizontal gene transfer;
Salmonella enterica;
ANTIBIOTIC-RESISTANCE;
FOODBORNE OUTBREAKS;
READ ALIGNMENT;
GENOME;
COLONIZATION;
QUALITY;
TOOL;
STRAINS;
85.
Expanding Culturomics from Gut to Extreme Environmental Settings
作者:
Sood Utkarsh
;
Kumar Roshan
;
Hira Princy
期刊名称:
《msystems》
|
2021年第4期
关键词:
metagenomics;
culturomics;
extremophiles;
microbial dark matter;
extremozymes;
METAGENOMICS;
BACTERIA;
GENOMES;
86.
Exercise and the Microbiome: Mechanistic Perspectives of the Impact of Exercise on the Gut-Vascular Axis
作者:
Cook Marc D.
;
Hogue Taylor
期刊名称:
《msystems》
|
2021年第4期
关键词:
colon mucosa biome;
dysbiosis;
exercise;
gut microbiome;
hypertension;
87.
Identification and Differentiation of Pseudomonas Species in Field Samples Using an rpoD Amplicon Sequencing Methodology
作者:
Lauritsen Jonas Greve
;
Hansen Morten Lindqvist
;
Bech Pernille KjersgaardJelsbak LarsGram LoneStrube Mikael Lenz
期刊名称:
《msystems》
|
2021年第4期
关键词:
microbiome analyses;
Pseudomonas;
diversity;
rpoD;
16S rRNA;
amplicon sequencing;
PHYLOGENETIC-RELATIONSHIPS;
NUCLEOTIDE-SEQUENCES;
GENUS PSEUDOMONAS;
SOIL;
FLUORESCENS;
THIOQUINOLOBACTIN;
SIDEROPHORE;
POPULATION;
ANTIFUNGAL;
DIVERSITY;
88.
Enhanced Biosynthesis of Fatty Acids Is Associated with the Acquisition of Ciprofloxacin Resistance in Edwardsiella tarda
作者:
Su Yu-Bin
;
Kuang Su-Fang
;
Ye Jin-ZhouTao Jian-JunLi HuiPeng Xuan-XianPeng Bo
期刊名称:
《msystems》
|
2021年第4期
关键词:
Edwardsiella tarda;
ciprofloxacin resistance;
proteomics;
energy metabolism;
pyruvate cycle;
biosynthesis of fatty acids;
ANTIBIOTIC-RESISTANCE;
ESCHERICHIA-COLI;
AEROMONAS-HYDROPHILA;
METABOLIC MECHANISM;
PROTEOME;
GENES;
ITRAQ;
FLUOROQUINOLONES;
SUSCEPTIBILITY;
EXPRESSION;
89.
Making Sense of a Scent-Sensing Metaphor for Microbes and Environmental Predictions
作者:
Bowman Jeff S.
期刊名称:
《msystems》
|
2021年第4期
关键词:
16S rRNA gene;
machine learning;
microbial community structure;
random forest;
90.
Accessory Genomic Epidemiology of Cocirculating Acinetobacter baumannii Clones
作者:
Mateo-Estrada Valeria
;
Luis Fernandez-Vazquez Jose
;
Moreno-Manjon JuliaHernandez-Gonzalez Ismael L.Rodriguez-Noriega EduardoMorfin-Otero RayoDolores Alcantar-Curiel MariaCastillo-Ramirez Santiago
期刊名称:
《msystems》
|
2021年第4期
关键词:
genomic epidemiology;
bacterial clones;
transmission dynamics;
accessory genome;
Acinetobacter baumannii;
molecular epidemiology;
RECOMBINATION;
RESISTANT;
STRAINS;
91.
Deciphering Symbiotic Interactions of 'Candidatus Aenigmarchaeota' with Inferred Horizontal Gene Transfers and Co-occurrence Networks
作者:
Li Yu-Xian
;
Rao Yang-Zhi
;
Qi Yan-LingQu Yan-NiChen Ya-TingJiao Jian-YuShu Wen-ShengJiang HongchenHedlund Brian P.Hua Zheng-ShuangLi Wen-Jun
期刊名称:
《msystems》
|
2021年第4期
关键词:
"Ca. Aenigmarchaeota";
DPANN;
symbiont;
horizontal gene transfer;
co-occurrence network;
coevolution network;
MULTIPLE SEQUENCE ALIGNMENT;
NANOARCHAEUM-EQUITANS;
IGNICOCCUS-HOSPITALIS;
REVERSE GYRASE;
DIVERSITY;
ARCHAEA;
GENOME;
INSIGHTS;
BACTERIAL;
DATABASE;
92.
Cell Surface Polysaccharides Represent a Common Strategy for Adsorption among Phages Infecting Lactic Acid Bacteria: Lessons from Dairy Lactococci and Streptococci COMMENT
作者:
Mahony Jennifer
期刊名称:
《msystems》
|
2021年第4期
关键词:
bacteriophage;
cell wall polysaccharide;
receptor;
virome;
food fermentation;
sustainable food systems;
bacteriophages;
RECEPTOR;
93.
A Scale-Free, Fully Connected Global Transition Network Underlies Known Microbiome Diversity
作者:
Jing Gongchao
;
Zhang Yufeng
;
Liu LuWang ZengbinSun ZhengKnight RobSu XiaoquanXu Jian
期刊名称:
《msystems》
|
2021年第4期
关键词:
microbiome transition;
scale-free;
network;
data mining;
beta diversity;
94.
Characterizing the Uncultivated Microbial Minority: towards Understanding the Roles of the Rare Biosphere in Microbial Communities
作者:
Saw Jimmy H. W.
期刊名称:
《msystems》
|
2021年第4期
关键词:
rare biosphere;
microbial;
diversity;
ecology;
evolution;
microbial ecology;
microbial evolution;
EVOLUTION;
DIVERSITY;
INSIGHTS;
ARCHAEA;
GENOME;
ORIGIN;
95.
Promoter Architecture Differences among Alphaproteobacteria and Other Bacterial Taxa
作者:
Myers Kevin S.
;
Noguera Daniel R.
;
Donohue Timothy J.
期刊名称:
《msystems》
|
2021年第4期
关键词:
bioinformatics;
motif prediction;
promoters;
transcription;
COLI RNA-POLYMERASE;
ESCHERICHIA-COLI;
SIGMA FACTORS;
STRUCTURAL BASIS;
TRANSCRIPTION;
SEQUENCE;
RECOGNITION;
CARD;
STRESS;
MEMBER;
96.
Tracking Microbial Evolution in the Subseafloor Biosphere
作者:
Anderson Rika E.
期刊名称:
《msystems》
|
2021年第4期
关键词:
marine subsurface;
microbial evolution;
POPULATION GENOMICS;
DIVERSITY;
DYNAMICS;
GENES;
OCEAN;
FLOW;
97.
Introducing the Microbes and Social Equity Working Group: Considering the Microbial Components of Social, Environmental, and Health Justice
作者:
Ishaq Suzanne L.
;
Parada Francisco J.
;
Wolf Patricia G.Bonilla Carla Y.Carney Megan A.Benezra AmberWissel EmilyFriedman MichaelDeAngelis Kristen M.Robinson Jake M.Fahimipour Ashkaan K.Manus Melissa B.Grieneisen LauraDietz Leslie G.Pathak AshishChauhan AshviniKuthyar SahanaStewart Justin D.Dasari Mauna R.Nonnamaker EmilyChoudoir MalloryHorve Patrick F.Zimmerman Naupaka B.Kozik Ariangela J.Darling Katherine WeatherfordRomero-Olivares Adriana L.Hariharan JananiFarmer NicoleMaki Katherine A.Collier Jackie L.ODoherty Kieran C.Letourneau JeffreyKline JeffMoses Peter L.Morar Nicolae
期刊名称:
《msystems》
|
2021年第4期
关键词:
biopolitics;
health disparities;
social determinants of health;
structural determinants of health;
integrated research;
microbiomes;
RESEARCH PARTICIPATION;
DISPARITIES;
PERSPECTIVES;
PRIVILEGE;
AMERICANS;
BARRIERS;
STUDENTS;
LESSONS;
MATTERS;
VALUES;
98.
Genomic Diversity and Antimicrobial Resistance of Haemophilus Colonizing the Airways of Young Children with Cystic Fibrosis
作者:
Watts Stephen C.
;
Judd Louise M.
;
Carzino RosemaryRanganathan SarathHolt Kathryn E.
期刊名称:
《msystems》
|
2021年第4期
关键词:
Haemophilus;
Haemophilus influenzae;
Haemophilus parainfluenzae;
antibiotic resistance;
cystic fibrosis;
genomics;
RESPIRATORY-TRACT INFECTIONS;
PENICILLIN-BINDING PROTEIN-3;
BETA-LACTAM RESISTANCE;
AMINO-ACID SUBSTITUTIONS;
ANTIBIOTIC-RESISTANCE;
STREPTOCOCCUS-PNEUMONIAE;
PSEUDOMONAS-AERUGINOSA;
OROPHARYNGEAL CULTURES;
LUNG-DISEASE;
R-PACKAGE;
99.
Evolution in a Community Context: towards Understanding the Causes and Consequences of Adaptive Evolution in the Human Gut Microbiota over Short Time Scales
作者:
Scanlan Pauline Deirdre
期刊名称:
《msystems》
|
2021年第4期
关键词:
coevolution;
gut microbiota;
microbial evolution;
microbiome;
microcosm;
bacteriophages;
microbial ecology;
BACTERIA;
BLASTOCYSTIS;
ADAPTATION;
DIVERSITY;
100.
Rapid, Large-Scale Wastewater Surveillance and Automated Reporting System Enable Early Detection of Nearly 85 of COVID-19 Cases on a University Campus
作者:
Karthikeyan Smruthi
;
Nguyen Andrew
;
McDonald DanielZong YijianRonquillo NancyRen JuntingZou JingjingFarmer SawyerHumphrey GregHenderson DianaJavidi TaraMesser KarenAnderson CherylSchooley RobertMartin Natasha K.Knight Rob
期刊名称:
《msystems》
|
2021年第4期
关键词:
COVID-19;
SARS-CoV-2;
wastewater epidemiology;
high-throughput;
上一页
1
2
下一页
意见反馈
回到顶部
回到首页