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Compact optical diagnostic device for isothermal nucleic acids amplification

机译:用于等温核酸扩增的紧凑型光学诊断装置

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We recently reported the successful use of the loop-mediated isothermal amplification (LAMP) reaction for hepatitis B virus (HBV) DNA amplification and its optimal primer design method. In this study, we report the development of an integrated isothermal device for both amplification and detection of targeted HBV DNA. It has two major components, a disposable polymethyl methacrylate (PMMA) micro-reactor and a temperature-regulated optical detection unit (base apparatus) for real-time monitoring of the turbidity changes due to the precipitation of DNA amplification by-product, magnesium pyrophosphate. We have established a correlation curve (R~2 = 0.99) between the concentration of pyrophosphate ions and the level of turbidity by using a simulated chemical reaction to evaluate the characteristics of our device. For the applications of rapid pathogens detection, we also have established a standard curve (R~2 =0.96) by using LAMP reaction with a standard template in our device. Moreover, we also have successfully used the device on seven clinical serum specimens where HBV DNA levels have been confirmed by real-time PCR. The result indicates that different amounts of HBV DNA can be successfully detected by using this device within 1 h.
机译:我们最近报道了成功地将环介导的等温扩增(LAMP)反应用于乙型肝炎病毒(HBV)DNA扩增及其最佳引物设计方法。在这项研究中,我们报告了用于扩增和检测目标HBV DNA的集成等温设备的开发。它具有两个主要组件,一个是一次性使用的聚甲基丙烯酸甲酯(PMMA)微反应器,另一个是用于实时监测由于DNA扩增副产物焦磷酸镁沉淀而引起的浊度变化的温度调节光学检测单元(基本设备)。 。通过使用模拟化学反应来评估设备的特性,我们在焦磷酸盐离子的浓度和浊度之间建立了相关曲线(R〜2 = 0.99)。对于病原体快速检测的应用,我们还通过在设备中使用LAMP反应与标准模板建立了标准曲线(R〜2 = 0.96)。此外,我们还成功地在7个临床血清标本上使用了该设备,这些样品通过实时PCR确认了HBV DNA的水平。结果表明,使用此设备在1小时内可以成功检测到不同量的HBV DNA。

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