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Preferential translation of Hsp83 in Leishmania requires a thermosensitive polypyrimidine-rich element in the 3′ UTR and involves scanning of the 5′ UTR

机译:Hsp83在利什曼原虫中的优先翻译需要在3'UTR中有一个富含热敏多嘧啶的元件,并需要扫描5'UTR

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摘要

Heat shock proteins (HSPs) provide a useful system for studying developmental patterns in the digenetic Leishmania parasites, since their expression is induced in the mammalian life form. Translation regulation plays a key role in control of protein coding genes in trypanosomatids, and is directed exclusively by elements in the 3′ untranslated region (UTR). Using sequential deletions of the Leishmania Hsp83 3′ UTR (888 nucleotides [nt]), we mapped a region of 150 nt that was required, but not sufficient for preferential translation of a reporter gene at mammalian-like temperatures, suggesting that changes in RNA structure could be involved. An advanced bioinformatics package for prediction of RNA folding (UNAfold) marked the regulatory region on a highly probable structural arm that includes a polypyrimidine tract (PPT). Mutagenesis of this PPT abrogated completely preferential translation of the fused reporter gene. Furthermore, temperature elevation caused the regulatory region to melt more extensively than the same region that lacked the PPT. We propose that at elevated temperatures the regulatory element in the 3′ UTR is more accessible to mediators that promote its interaction with the basal translation components at the 5′ end during mRNA circularization. Translation initiation of Hsp83 at all temperatures appears to proceed via scanning of the 5′ UTR, since a hairpin structure abolishes expression of a fused reporter gene.
机译:热激蛋白(HSP)为研究双生利什曼原虫寄生虫的发育模式提供了有用的系统,因为它们的表达是在哺乳动物的生命形式中诱导的。翻译调控在锥虫的蛋白质编码基因的控制中起着关键作用,并且仅由3'非翻译区(UTR)中的元件指导。使用利什曼原虫Hsp83 3'UTR(888个核苷酸[nt])的顺序缺失,我们绘制了一个150 nt的区域,该区域是必需的,但不足以在哺乳动物样温度下优先翻译报告基因,提示RNA发生了变化结构可能会涉及。用于预测RNA折叠(UNAfold)的高级生物信息学程序包在包括聚嘧啶束(PPT)的高度可能的结构臂上标记了调控区。该PPT的诱变消除了融合的报告基因的完全优先翻译。此外,温度升高导致调节区域比缺少PPT的区域融化得更广泛。我们建议在升高的温度下3'UTR中的调控元件更容易被介体利用,从而促进其在mRNA环化过程中与5'端的基础翻译成分相互作用。 Hsp83在所有温度下的翻译起始似乎都是通过扫描5'UTR进行的,因为发夹结构消除了融合的报告基因的表达。

著录项

  • 来源
    《RNA》 |2010年第2期|364-374|共11页
  • 作者单位

    Department of Life Sciences, Ben Gurion University of the Negev, Beer Sheva 84105, Israel;

    Department of Computer Sciences, Ben Gurion University of the Negev, Beer Sheva 84105, Israel;

    Department of Life Sciences, Ben Gurion University of the Negev, Beer Sheva 84105, Israel;

    Department of Life Sciences, Ben Gurion University of the Negev, Beer Sheva 84105, Israel;

    Department of Life Sciences, Ben Gurion University of the Negev, Beer Sheva 84105, Israel;

    Department of Computer Sciences, Ben Gurion University of the Negev, Beer Sheva 84105, Israel;

    Department of Life Sciences, Ben Gurion University of the Negev, Beer Sheva 84105, Israel;

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  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类
  • 关键词

    Leishmania; translation regulation; Hsp83; 3′ UTR; polypyrimidine tract; scanning of 5′ UTR;

    机译:利什曼原虫;翻译调控;Hsp83;3′UTR;聚嘧啶束;5′UTR扫描;

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