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Parallel phenotypic analysis of sporulation and postgermination growth in Saccharomyces cerevisiae

机译:酿酒酵母孢子形成和发芽后生长的平行表型分析

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摘要

We have quantitatively monitored the sporulation and germination efficiencies of ≈4,200 yeast deletion strains in parallel by using a molecular bar coding strategy. In a single study, we doubled the number of genes functionally implicated in sporulation to 400, identifying both positive and negative regulators. Our set of 261 sporulation-deficient genes illustrates the importance of autoph-agy, carbon utilization, and transcriptional machinery during sporulation. These general cellular factors are more likely to exhibit fitness defects when deleted and less likely to be transcriptionally regulated than sporulation-specific genes. Our postgermination screening assay identified recombination/chromosome segregation genes, aneuploid strains, and possible germination-specific factors. Finally, our results facilitate a genome-wide comparison of expression pattern and mutant phenotype for a developmental process and suggest that 16% of genes differentially expressed during sporulation confer altered efficiency of spore production or defective postgermination growth when disrupted.
机译:我们已经通过使用分子条形码技术并行地定量监测了约4,200个酵母缺失菌株的孢子形成和发芽效率。在一项研究中,我们将与孢子形成功能相关的基因数量增加了一倍,达到400个,从而确定了正调控因子和负调控因子。我们的261个孢子形成缺陷基因集说明了孢子形成过程中自噬,碳利用和转录机制的重要性。与孢子特异性基因相比,这些一般的细胞因子在缺失时更可能表现出适应性缺陷,并且不太可能受到转录调控。我们的发芽后筛选测定可鉴定重组/染色体分离基因,非整倍体菌株以及可能的发芽特异性因子。最后,我们的研究结果促进了发育过程中表达模式和突变表型的全基因组比较,并表明在孢子形成过程中差异表达的16%基因被破坏时,孢子产生效率或发芽后生长缺陷。

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