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Gas-Phase Folding of a Prototypical Protonated Pentapeptide: Spectroscopic Evidence for Formation of a Charge-Stabilized β-Hairpin

机译:原型质子化五肽的气相折叠:形成电荷稳定的β-发夹的光谱证据。

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摘要

Ultraviolet and infrared-ultraviolet (IR-UV) double-resonance photofragment spectroscopy has been carried out in a tandem mass spectrometer to determine the three-dimensional structure of cryogenically cooled protonated C-terminally methyl esterified leucine enkephalin [YGGFL-OMe+H]~+. By comparing the experimental IR spectrum of the dominant conformer with the predictions of DFT M05-2X/6-31+G(d) calculations, a backbone structure was assigned that is analogous to that previously assigned by our group for the unmodified peptide [Burke, N.L.; et al. Int. J. Mass Spectrom. 2015, 378, 196], despite the loss of a C-terminal OH binding site that was thought to play an important role in its stabilization. Both structures are characterized by a type Ⅱ' β-turn around Gly~3-Phe~4 and a γ-turn around Gly~2, providing spectroscopic evidence for the formation of a β-hairpin hydrogen bonding pattern. Rather than disrupting the peptide backbone structure, the protonated N-terminus serves to stabilize the β-hairpin by positioning itself in a pocket above the turn where it can form H-bonds to the Gly~3 and C-terminus C=O groups. This β-hairpin type structure has been previously proposed as the biologically active conformation of leucine enkephalin and its methyl ester in the nonpolar cell membrane environment [Naito, A.; Nishimura, K. Curr. Top. Med. Chem. 2004, 4, 135-143].
机译:已在串联质谱仪中进行了紫外和红外-紫外(IR-UV)双共振光谱分析,以确定低温冷却的质子化的C末端甲基酯化的亮氨酸脑啡肽[YGGFL-OMe + H]的三维结构。 +。通过将主要构象异构体的实验红外光谱与DFT M05-2X / 6-31 + G(d)计算的预测值进行比较,所分配的骨架结构类似于我们之前为未修饰肽[Burke]分配的骨架结构,NL;等。诠释J.质谱。 2015,378,196],尽管丢失了C端OH结合位点,而该位点在其稳定中起着重要作用。两种结构的特征都是围绕Gly〜3-Phe〜4的Ⅱ'型β-转角和围绕Gly〜2的γ型转角,为形成β-发夹氢键结构提供了光谱学证据。质子化的N末端不是破坏肽主链结构,而是通过将自身定位在转弯上方的口袋中来稳定β-发夹,该口袋中它可以与Gly〜3和C末端C = O基团形成H键。先前已经提出这种β-发夹型结构作为亮氨酸脑啡肽及其甲基酯在非极性细胞膜环境中的生物活性构象[Naito,A。]。西村,K。库尔。最佳。中化学2004,4,135-143]。

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  • 来源
    《Journal of the American Chemical Society》 |2016年第8期|2849-2857|共9页
  • 作者单位

    Department of Chemistry, Purdue University, West Lafayette, Indiana 47907-2084, United States, Kellogg's, 2 Hamblin Avenue East, Battle Creek, MI 49017, United States;

    Department of Chemistry, Purdue University, West Lafayette, Indiana 47907-2084, United States;

    Department of Chemistry, Purdue University, West Lafayette, Indiana 47907-2084, United States, Kalsec, P.O. Box 50511, Kalamazoo, MI 49006, United States;

    Department of Chemistry, Purdue University, West Lafayette, Indiana 47907-2084, United States;

    Department of Chemistry, Purdue University, West Lafayette, Indiana 47907-2084, United States;

    Department of Chemistry, Purdue University, West Lafayette, Indiana 47907-2084, United States;

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