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Sequence and Surface Confinement Direct Cooperativity in Catalytic Precision Oligomers

机译:催化精密低聚物中的序列和表面限制直接协同作用

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摘要

Confinement and cooperativity are important design principles used by Nature to optimize catalytic activity in enzymes. In these biological systems, the precise sequence of the protein encodes for specific chain folding to preorganize critical amino acid side chains within defined binding pockets, allowing synergistic catalytic activation pathways to be expressed and triggered. Here we show that short synthetic precision oligomers with the optimal sequence of catalytic units, spatially arranged by dense surface grafting to form confined cooperative “pockets”, display an up to 5-fold activity improvement compared to a “mismatched” sequence or free oligomers using the (pyta)Cu/TEMPO/NMI-catalyzed aerobic selective oxidation of alcohols as a model reaction. We thus demonstrate that, in analogy with enzymes, sequence definition combined with surface grafting induce the optimized distribution, both radially (interchain) and axially (intrachain), of a catalytic triad, and that the impressive improvement of catalytic efficiency results predominantly from “matched” interchain interactions in the surface-confined system, thereby outperforming the homogeneous system. The concept presented here hence uncovers a new paradigm in the design of multifunctional molecular assemblies to control functions at a level approaching biological precision.
机译:限制和合作性是Nature用来优化酶催化活性的重要设计原则。在这些生物系统中,蛋白质的精确序列编码特定的链折叠,以在限定的结合口袋内预组织关键的氨基酸侧链,从而表达和触发协同催化激活途径。在这里,我们显示了具有最佳催化单元序列的短合成精密低聚物,通过密集的表面接枝在空间上排列以形成受限的协同“口袋”,与使用“不匹配”序列或游离低聚物相比,其活性提高了多达5倍。作为模型反应,由pytaCu / TEMPO / NMI催化的酒精有氧选择性氧化。因此,我们证明,与酶类似,序列定义与表面接枝相结合可诱导催化三联体在径向(链间)和轴向(链内)的最佳分布,并且催化效率的显着提高主要归因于“匹配”。表面受限系统中的链间相互作用,从而胜过同类系统。因此,此处提出的概念揭示了多功能分子组件设计中的新范式,以在接近生物学精度的水平上控制功能。

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  • 来源
    《Journal of the American Chemical Society》 |2018年第15期|5179-5184|共6页
  • 作者单位

    Institute of Condensed Matter and Nanosciences, Bio- and Soft Matter, Université Catholique de Louvain, 1348 Louvain-la-Neuve, Belgium;

    Institute of Condensed Matter and Nanosciences, Bio- and Soft Matter, Université Catholique de Louvain, 1348 Louvain-la-Neuve, Belgium;

    Institute of Condensed Matter and Nanosciences, Bio- and Soft Matter, Université Catholique de Louvain, 1348 Louvain-la-Neuve, Belgium;

  • 收录信息 美国《科学引文索引》(SCI);美国《工程索引》(EI);美国《生物学医学文摘》(MEDLINE);美国《化学文摘》(CA);
  • 原文格式 PDF
  • 正文语种 eng
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